Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 116 5e-21
seq31858 113 7e-20
seq46443 105 1e-17
seq52934 102 1e-16
seq14379 98.7 1e-15
seq63578 93.3 6e-14
>seq28572
Length=14732
Score = 116 bits (128), Expect = 5e-21
Identities = 109/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| ||||| || | | ||||||||||||||||||||||| || ||||| || |
Sbjct 2971 TTCCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCG 3030
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
|||| ||||| | ||| || | |||||| || || ||||||| | |||||| |||||||
Sbjct 3031 AAAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAG 3090
Query 146169 GAATTCCTTCTTTATCTTG 146187
| || ||||||||||| ||
Sbjct 3091 GGATGCCTTCTTTATCCTG 3109
Score = 111 bits (122), Expect = 2e-19
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| | || | || ||||| | ||| |||||||| ||||||||||| ||
Sbjct 1833 CCGCCTCTCAATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGAG 1892
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||||| || || | ||||||||| || ||||| | | |||||| || ||||||
Sbjct 1893 AGAGTTCTGCCGTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGGA 1952
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
||||| || |||||||| || || | || |||
Sbjct 1953 ATTCCCTCCTTATCTTGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGACT 2012
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|| || |||||||||||||||||||| ||||| | ||| ||||||||
Sbjct 2013 TCGAGGGTGATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 2059
Score = 109 bits (120), Expect = 8e-19
Identities = 160/233 (69%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | || | |||||||||||||| ||||| || ||||| ||||| |||
Sbjct 3201 CCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAA 3260
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| |||| || || || | ||| |||||||| || |||| | ||| ||||| ||||||
Sbjct 3261 AGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGA 3320
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACT---TTCT 146227
|| ||||| |||||||| ||||| ||| |||
Sbjct 3321 ATACCTTCCTTATCTTGAATTTTCGCCTTGACGTTTTCGATCGTATC---ACTCGGTTCA 3377
Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
||||| || ||||| |||||||| || || ||||| | ||| || ||||||||
Sbjct 3378 ACTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCATTTT 3430
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||||| || |||||||| | || || ||||| ||||| ||||| |||
Sbjct 1605 CCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAA 1664
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | ||| || | || ||||| || ||||| || | ||||||||| |||||
Sbjct 1665 AGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGG 1724
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| |||||
Sbjct 1725 ATTCCTTCTTTGTCTTG 1741
Score = 104 bits (114), Expect = 3e-17
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|| ||||| | || | || | ||||||||| ||||| ||| || ||||| ||||| ||
Sbjct 2061 CCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGA-ATATTGTAATCGGA 2119
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| |||| || ||| || | |||||| || |||||||| || | ||| ||||| || ||
Sbjct 2120 GAGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGG 2179
Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTAT--CTGAACTTTCT 146227
||||||||| |||||||| || | ||| | |||
Sbjct 2180 AATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGC--TCT 2237
Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| || ||||| |||||||| |||| ||||||| ||| ||||||||
Sbjct 2238 ACTTCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | || | || ||||| || || |||||||| || ||||| || |||
Sbjct 2289 CCACCTCTCAATCGGAGAACTAAATGCAATGTCGATTCTTTTTGGATGTTATAGTCCGAA 2348
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | ||| || | |||||| |||||||| || | | ||||||||| || |||
Sbjct 2349 AGAGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCAGGGGGA 2408
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| || ||||||||
Sbjct 2409 ATTCCCTCCTTATCTTG 2425
Score = 93.3 bits (102), Expect = 6e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128
||||||||||| || |||||||| || || ||||| |||||||||| || || ||
Sbjct 2535 ACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCG 2594
Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
| |||||| || || ||||| || | ||| ||||| || |||||||| || ||||| ||
Sbjct 2595 AGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCCTG 2653
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | || | || ||||| | || |||||||| || ||||| || ||
Sbjct 2745 CCACCTCTCAATCGAAGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAG 2804
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | ||| || | |||||| ||||| || || | | ||| ||||| || |||
Sbjct 2805 AGAGTTCTTCCATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGA 2864
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| |||||||||||
Sbjct 2865 ATTCCCTCTTTATCTTG 2881
>seq31858
Length=13054
Score = 113 bits (124), Expect = 7e-20
Identities = 150/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 10397 AAAATTAATAAAAACTGATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATTAGC 10456
|||||||||||| || ||| | | | |||||||| | ||||| | ||| |||
Sbjct 6480 AAAATTAATAAACACCGATCTTGCTCTGGAAATTCCGTCAAACTGTTACGGGAGAATAGT 6539
Query 10457 TCCCAGATCTGA-TTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACG 10515
|||| || ||| ||||| ||||| | || ||||| ||||||| || || || || |
Sbjct 6540 ACCCAAAT-TGAGCTTAGCATTAAATCACTTCATTGACATTGGAGGAGGTGTCATCGATG 6598
Query 10516 AAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAA 10575
||||||| |||||||||||||| | || ||||||||||||| || | |||| | ||
Sbjct 6599 AAGATTACAGAGGAAATGTGGGCATTATTATATTTAATCATTCCGATCATCATTTCAAAA 6658
Query 10576 TAAATAGAGGAGATAGAATATCTCAA 10601
| || |||||||| ||| |||||
Sbjct 6659 TCAAACGAGGAGATCAAATTGCTCAA 6684
>seq46443
Length=17015
Score = 105 bits (116), Expect = 1e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| ||||| ||||| | |||||||||||| || |||||||| |||
Sbjct 12695 CCACCTCTCAATCTCAATACTAAATGCAGAGTAGATTCTTTTTGGATGTTATAATCGGAA 12754
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| || | |||||| |||||||||||||| | ||| || || ||||||
Sbjct 12755 AGGGTACGTCCATCTTCGAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 12814
Query 146171 ATTCCT 146176
|| |||
Sbjct 12815 ATGCCT 12820
>seq52934
Length=6696
Score = 102 bits (112), Expect = 1e-16
Identities = 127/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||| ||||| || |||||||| | ||| || ||||| ||||| || || ||||| | |
Sbjct 3974 ATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGT 4033
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215
||||| || ||||| || |||||||||||||| ||||
Sbjct 4034 TGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTTCAATAGTA 4093
Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275
|| ||| ||| ||||| || ||||| |||||||| |||| ||||| | ||| || |||
Sbjct 4094 TCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGAAGATCTGC 4153
Query 146276 AT 146277
||
Sbjct 4154 AT 4155
>seq14379
Length=4834
Score = 98.7 bits (108), Expect = 1e-15
Identities = 94/118 (80%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 95572 AATAATAATCACGAAATACATAAACAA-TATACTGGATATTATGTATCAAAAGATCTAAT 95630
|||||||| | |||||| | |||||| ||| | | || |||| | ||||| || ||
Sbjct 4290 AATAATAAATATGAAATAAACAAACAAGTATCAGGTACAT-ATGTCTGCAAAGAACTCAT 4348
Query 95631 ATTAGATATTGCATCTTGGATAGCTCCTGAATTTTATTTAAAATGTAATGATATAATT 95688
||||| |||||||||||||| |||||||||| ||||| |||||||||||||| |||
Sbjct 4349 CTTAGACATTGCATCTTGGATTTCTCCTGAATTCTATTTGAAATGTAATGATATTATT 4406
>seq63578
Length=26733
Score = 93.3 bits (102), Expect = 6e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | | ||| | |||||| || | ||| |||||||| || ||||||||
Sbjct 11592 TTCCACCACGTAATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCAC 11651
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||| | || ||| || || ||||| || ||||| ||||||| |||||| || || |
Sbjct 11652 TCAGAGTACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTG 11711
Query 146169 GAATTCCTTCTTTATCTTG 146187
| || ||||||||||| ||
Sbjct 11712 GTATGCCTTCTTTATCCTG 11730
Score = 89.7 bits (98), Expect = 8e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||||| ||| | ||| || ||||| | ||| |||||||| |||||||||||
Sbjct 12276 TTCCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGC 12335
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || | | || || |||||||| || || ||||| ||||| ||||| || || |
Sbjct 12336 TCAAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTG 12395
Query 146169 GAATTCCTTCTTTATCTTG 146187
| || |||||||| |||||
Sbjct 12396 GGATGCCTTCTTTGTCTTG 12414
Score = 87.8 bits (96), Expect = 3e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109
||| || | ||| | || |||||||| | || || || || |||||||||||
Sbjct 11365 TCCGCCACGAAGACGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCT 11424
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| || | || ||| || ||||| |||||||| ||||||||||| ||||| || || ||
Sbjct 11425 TAACGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGG 11484
Query 146170 AATTCCTTCTTTATCTTG 146187
|| ||||||||||||||
Sbjct 11485 GATACCTTCTTTATCTTG 11502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742779286085120
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