Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq54470 196 4e-45
>seq54470
Length=54847
Score = 196 bits (216), Expect = 4e-45
Identities = 246/338 (73%), Gaps = 0/338 (0%)
Strand=Plus/Minus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| ||| | ||||| || || ||||| ||||||||||| || |||||||| || ||
Sbjct 48713 GGCGATCTCGGTCCAGTTTACGGATTCCAATGGAGACACTTCGGAGCTGAGTACAAAGAT 48654
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
||| || | |||| | |||| | |||||| | |||||||| ||| || |||
Sbjct 48653 ATGCACGCCGATTACTCCAACAAAGGCATCGATCAACTGCAAAATGTCATTGATACCATT 48594
Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397
|||| ||||| |||| |||||||| ||||||||||| ||||| | |||| | ||
Sbjct 48593 AAAAATAACCCCGACGATAGAAGAATAATTTTATGCGCTTGGAATCCGTTAGATTTACCC 48534
Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457
||||| | ||||| ||||| || || ||||||| || |||| |||||
Sbjct 48533 AAGATGGCCCTACCTCCTTGTCACTGTTTAGTGCAGTTTTACGCTGTTAATGGCGAATTA 48474
Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517
|||||||||||||||||||| || || |||||||| | || || ||||| ||||| ||
Sbjct 48473 TCGTGTCAAATGTATCAACGTTCTGCCGATATGGGTTTAGGAGTACCTTTTAATATCGCC 48414
Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555
||||| | || || || || ||||| |||||||||||
Sbjct 48413 AGTTACTCCCTACTCACTTACATGATCGCACATGTTAC 48376
Score = 87.8 bits (96), Expect = 1e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103
||||| || | || |||||||| |||||||||||||| || ||||||||| || |||||
Sbjct 48945 TTTCCGCTACTGACCACGAAACGAGTATTTTGGAAAGGTGTCGTTGAAGAGCTACTATGG 48886
Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGA 20161
|| || | |||||| || || | | || | || ||||||||||| |||||||
Sbjct 48885 TTCATCAGAGGATCTACGAACGCGAAAGAATTATCCGACAAAGGAGTTAAAATTTGGA 48828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398792917688770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |