Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq7792 145 7e-30
seq13914 118 1e-21
>seq7792
Length=27931
Score = 145 bits (160), Expect = 7e-30
Identities = 155/203 (76%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 14245 TTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302
|||||| ||||| || ||||| ||||| | ||||| ||||| | |||||||||||||
Sbjct 19194 TTCGTTACTGAAA--GTCAATCCAGGCATTAGGCCTCGCTTTTTAAGCCAAAATATTGCA 19251
Query 14303 GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCA 14362
|| || ||| |||||||| || || || || |||||||||||||| | | |||||||
Sbjct 19252 GCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACGCTATGATCCTTTCTCCA 19311
Query 14363 AACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 14422
|| | || ||||| | | ||||||||| ||||| || | ||| || |||| | ||
Sbjct 19312 AAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTGCTTTCTTCTTAACACAA 19371
Query 14423 TCCATTGTTTCAATAGCATTAAA 14445
|||||||||||||||||| ||
Sbjct 19372 GGCATTGTTTCAATAGCATTGAA 19394
Score = 86.0 bits (94), Expect = 6e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || |||| | |||||| | |||||| ||||| ||||| || |||||||| | |
Sbjct 18705 ATAACTCCACTTTTCTTATATTCTCCAACTCTCTTTTCGAAGAAATTCGTTTTACCATTC 18764
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATT 13992
| |||||||||||||||||||| || || ||
Sbjct 18765 AAGGATATATTTTCCATAAAATCGAAAGGGTT 18796
>seq13914
Length=11729
Score = 118 bits (130), Expect = 1e-21
Identities = 163/227 (72%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532
|||||| || ||||| | ||||| |||||||| || |||| || || || | || ||
Sbjct 8204 AATGTAAGTGTCAATCAACAAGCTGTACATTTCTGAATGTACATTCTCAATTGTGATTTG 8263
Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592
||| || |||||| |||| ||||| | |||||| ||| | |||| | ||| | ||
Sbjct 8264 AAATCCGTAAAAAAATCTGGCTTCAGGAATTTGTACTTCTTGGAAAAAACGCTCGACTAA 8323
Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14652
|||||||||||| ||||||||| || || |||||||| || | || ||| || |
Sbjct 8324 ATTTTCATTAACGATACCATCAGAGGCAGCGAAAAATGCTAAAACGTGGGAAATGAATTT 8383
Query 14653 TTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAA 14699
| |||||| | ||||||| |||||| |||||| ||||||
Sbjct 8384 CTTCTCTTCGGGTTTCAGTTTTTCCCAATCTCTGAAATCC-TAGAAA 8429
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/145 (75%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 13850 AAAAACTAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATA--ACGC 13907
||||||||||||||| |||| || || |||| || | ||| |||| | || |
Sbjct 7349 AAAAACTAAAAATCAGCATCCAATTTGAATTCATTTTCACCC--GTTGGAAACATGACTC 7406
Query 13908 CCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATA 13967
| |||| | ||||| | |||||||| |||||||| || |||||||| | || ||||
Sbjct 7407 CACTTTTCTTGTATTCGCCTACTCTTTTCTCAAAGAAATTCGTTTTACCGTTTAGAGATA 7466
Query 13968 TATTTTCCATAAAATCAAATGGATT 13992
|||||||||||||||| ||||| ||
Sbjct 7467 TATTTTCCATAAAATCGAATGGGTT 7491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481860927082480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |