Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_004348.1 Length=40679 Score E Sequences producing significant alignments: (Bits) Value seq9614 89.7 1e-13 >seq9614 Length=652 Score = 89.7 bits (98), Expect = 1e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 20090 GAGGCCGCATGACACACACTGTCAAAACCATTCCAGATATGCTCATAGAGACATACGGAA 20149 ||||||||||||| | | || |||||||||||||| |||||| | || |||||||||| Sbjct 503 GAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGAAACATACGGAA 444 Query 20150 ACCAGACAGAAGTAGCCAGGCGATTGTCGTGCCATCGAAACACAGTCAGGCGCTATCTGT 20209 | |||||||||||||| | || || || ||| || ||||| || | Sbjct 443 ATCAGACAGAAGTAGCACGCAGACTGAAATGTAGTCGCGGTACGGTCAGAAAATACGTTG 384 Query 20210 ACGACAAAGAAGCTAGGTATCACGCCATCGTTAACGGCGTTTTAATGATTCATC 20263 | || ||||| | | ||||||||||| |||| |||| | ||| |||||| Sbjct 383 ATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTTCTCATGGTTCATC 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129927055237812