Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 134 9e-27
seq28572 111 1e-19
seq52934 100 2e-16
>seq63578
Length=26733
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
|||||||| | ||||| |||||||| |||||||| || ||| || | || |||
Sbjct 12524 ACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTGCGGCCATCTTCC 12583
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280
||||| || || ||| ||||| ||||||||||| | || || |||||||| || |
Sbjct 12584 AATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCTTCTTTATCTTGA 12643
Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340
||| ||| || ||| ||||| ||| |||| ||| |||| ||| || ||||||
Sbjct 12644 ATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAAGTAATGGTTTTT 12703
Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| ||||||||||||||||| |||||||| ||
Sbjct 12704 CCGGTAAGAGTTTTTACGAAGATTTGCATCTT 12735
Score = 98.7 bits (108), Expect = 6e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
||||| || | || || ||||| || || || |||||| || | | | || |||
Sbjct 11612 ACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCC 11671
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280
|| || || || ||| || || ||||||||||| | |||||||||||||| || |
Sbjct 11672 AACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCCTTCTTTATCCTGA 11731
Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340
|| ||| || ||| ||| || ||| |||| || |||| ||||| ||||||
Sbjct 11732 ATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCAAGGTTATGGTTTTT 11791
Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || ||||| ||||||||||||||
Sbjct 11792 CCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 91.5 bits (100), Expect = 9e-14
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|| || |||||||| | || || || ||||| ||||||||||| || || | |
Sbjct 11834 CGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTTAACGTGCGGCCG 11893
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||| || || || ||||| || |||||||| | || || ||||||||
Sbjct 11894 TCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGAATACCTTCTTTG 11953
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| |||| ||| || | | || || ||| || | || |||| || ||
Sbjct 11954 TCTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTACTTCCAACGTGATA 12013
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||||| || || || ||||||||||||||||||||
Sbjct 12014 GTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 89.7 bits (98), Expect = 3e-13
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| || | || ||||| || ||||||| || |||||||| || || ||||| ||
Sbjct 12049 ACCACCACGTAGACGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCT 12108
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|||| | | || || ||||| || || || ||||| | ||||||||| | ||
Sbjct 12109 CAAAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGG 12168
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| |||||||| || | | | || |||||| ||| || ||||| ||||
Sbjct 12169 GATACCTTCTTTATCTTGGATTTTTGC---TTTTACATTTTCGATTGTGTCAGATGGTTC 12225
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || | || || |||||||| || || ||||| ||||||||||||||
Sbjct 12226 GACTTCTAACGTGATAGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 12276
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| |||||||| | || ||||| || || ||||| ||||| || || |
Sbjct 11378 CGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTTAACGTGCGGCCA 11437
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||||||||||||| || || || | |||||||| | || || ||||||||
Sbjct 11438 TCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGGGATACCTTCTTTA 11497
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| ||| ||| || | | || || ||| |||| || |||| || ||
Sbjct 11498 TCTTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACTTCCAAGGTAATA 11557
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || | |||||| ||||||||||||||
Sbjct 11558 GTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCAT 11592
>seq28572
Length=14732
Score = 111 bits (122), Expect = 1e-19
Identities = 159/222 (72%), Gaps = 14/222 (6%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTT-- 33212
|||||||||||||||| ||||||||||| || ||||||||||| || | |||||
Sbjct 1617 CGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAAA----GAGTTCT 1672
Query 33213 --GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270
|| || | |||||||| || |||||||||||||| || | || || |||||
Sbjct 1673 ACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGGATTCCTTC 1732
Query 33271 TTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327
||| || | | | ||| || || ||| || |||||| | |||| || || ||
Sbjct 1733 TTTGTCTTGGATCTTAGCC---TTGACGTTTTCGATGGTGTCGCTAGGTTCGACTTCGAG 1789
Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| |||||||| || || | || || ||||| ||||||||
Sbjct 1790 AGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 102 bits (112), Expect = 5e-17
Identities = 166/238 (70%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || || | |||||||| || ||||| || ||||| ||||||||||| ||
Sbjct 3200 ACCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGA 3259
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| | | ||| || | |||||||||| || || | |||||| || || | ||
Sbjct 3260 AAGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGG 3319
Query 33262 TATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| ||||| || || || ||||| || || ||| ||||| || | ||||
Sbjct 3320 AATACCTTCCTTATCTTGAATTTTCGCC---TTGACGTTTTCGATCGTATCACTCGGTTC 3376
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATG 33376
||| || || || || ||||| || || | ||||||||||| || ||||| ||| ||
Sbjct 3377 AACTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCATTTTTCTG 3434
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/235 (69%), Gaps = 14/235 (6%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || || | ||| | ||| || || || || ||||| ||||||||||| ||
Sbjct 2060 ACCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGA 2119
Query 33202 CAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
| | ||| | || || | ||| || || ||| ||||||||||| || || |
Sbjct 2120 GA----GGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTG 2175
Query 33258 TGGGTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
||| || ||||| || || | | | ||| || || ||| || ||||| |||
Sbjct 2176 GGGGAATTCCTTCCTTATCTTGGATTTTAGCC---TTGACGTTTTCGATGGTGTCACTGG 2232
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| | || || ||||| || ||||| ||||| || ||||| ||||| ||||||||
Sbjct 2233 GCTCTACTTCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 91.5 bits (100), Expect = 9e-14
Identities = 148/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
|||||||| |||||||| |||||||| || |||||||| || | | | | ||| ||
Sbjct 2535 ACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCG 2594
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280
| ||| || || || ||||||||||| || || | ||| || || || || || |
Sbjct 2595 AGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCCTGA 2654
Query 33281 A---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
| | ||| || || ||| || ||||| |||| | || || ||||| || |||
Sbjct 2655 ATTTTAGCC---TTGACATTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTT 2711
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || | ||||| |||||||| |||||
Sbjct 2712 TTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 86.0 bits (94), Expect = 4e-12
Identities = 160/232 (69%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | || | |||||||| || || || |||||||| || || || || ||
Sbjct 2973 CCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGA- 3031
Query 33203 AAATTGAGTTGG--TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
|| || | || || | ||| || || || || | |||||||||||||| |
Sbjct 3032 -AAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAG 3090
Query 33261 GTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
| ||||||||||| || ||| |||| | || ||| |||||||||| | || |
Sbjct 3091 GGATGCCTTCTTTATCCTGAATTTTTGCCT---TGACGTTTTCAATCGTGTCGCTAGGCT 3147
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || ||||| || ||||| || || | ||||||||||| || |||||
Sbjct 3148 CGACTTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || || | || |||||||||||||| |||||||| || || || || ||
Sbjct 2288 ACCACCTCTCAATCGGAGAACTAAATGCAATGTCGATTCTTTTTGGATGTTATAGTCCGA 2347
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| | | | || || | ||| || ||| ||| || | ||||||||| || | |||
Sbjct 2348 AAGAGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCAGGGGG 2407
Query 33262 TATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| || || || || || | ||| || || ||| |||||||| | || |
Sbjct 2408 AATTCCCTCCTTATCTTGAATTTTGGCC---TTGACATTTTCGATCGTGTCACTAGGCTC 2464
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || ||||| || || | || || ||||||||||||||
Sbjct 2465 GACCTCGAGTGTGATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2515
>seq52934
Length=6696
Score = 100 bits (110), Expect = 2e-16
Identities = 139/194 (72%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TCATCCAATTGCTTTCCACTA 33235
||||||| ||||||||||| || | ||||| || ||||||||||||||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATA----GAGTTCTACCATCTTCCAATTGCTTTCCGGCG 4021
Query 33236 AATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACT 33295
|| || |||||||||||||| | || || |||||||| || ||| ||||||
Sbjct 4022 AAGATCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACA 4081
Query 33296 GTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTT 33355
||| ||| || || |||| || || ||||| |||||||| ||||| || |||||
Sbjct 4082 TTTTCAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTC 4141
Query 33356 ACGAAAATTTGCAT 33369
||||| || |||||
Sbjct 4142 ACGAAGATCTGCAT 4155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318465292190628
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