Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 140 2e-28
seq52934 118 8e-22
seq28572 95.1 9e-15
>seq63578
Length=26733
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| |||||||| || ||| ||| || ||||||||||||||| |||| || ||||
Sbjct 11381 AAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTTAACGTGCGGCCATCT 11440
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|||||||| ||||| || || ||||| | |||||||| | || | |||||||||||||
Sbjct 11441 TCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGGGATACCTTCTTTATCT 11500
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|||||| ||| || | | | ||||| | ||| || || || | ||||| ||
Sbjct 11501 TGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACTTCCAAGGTAATAGTC 11560
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| ||||||||||| ||||| || ||||||||
Sbjct 11561 TTGCCGGTTAAAGTTTTCACGAAAATTTGCAT 11592
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
|||||||| ||||| |||||||||||||| || ||| | ||| || |||| |||
Sbjct 12524 ACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTGCGGCCATCTTCC 12583
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
|||||||| || ||||| || |||||||||||||| | || | |||||||||||| |
Sbjct 12584 AATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCTTCTTTATCTTGA 12643
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
|| || |||||| | | | ||||| | || || || || | ||||| |||||
Sbjct 12644 ATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAAGTAATGGTTTTT 12703
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||| | ||| || || || ||||||||
Sbjct 12704 CCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 43904 AATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGC 43963
||||| | ||||| || || ||| ||||| ||||| |||||||| | | |||
Sbjct 11603 AATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGTACGG 11662
Query 43964 TCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCT 44023
|||| ||||| ||||| || ||||| ||||| ||||||||||| | |||| ||||||
Sbjct 11663 CCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCCTTCT 11722
Query 44024 TTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTA 44083
||||| |||||| |||||| | ||| ||||| | ||| ||||| || | ||
Sbjct 11723 TTATCCTGAATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCAAGGTT 11782
Query 44084 ATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| ||||| || || | || || || || ||||||||
Sbjct 11783 ATGGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 114 bits (126), Expect = 9e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| ||||||||||| ||| || ||||| ||||| |||||| |||| || | ||
Sbjct 11836 TAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTTAACGTGCGGCCGTC 11895
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || || || || || || |||||||| | || | ||||||||| ||
Sbjct 11896 TTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGAATACCTTCTTTGTC 11955
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| ||| || ||| || | | | ||||| | ||||| || || | ||| || ||
Sbjct 11956 TTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTACTTCCAACGTGATAGT 12015
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||||||| | || || || || ||||||||
Sbjct 12016 TTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| || ||||| || ||| |||||||| |||||||||||| | || ||| | ||
Sbjct 12292 TAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAAGGTACGACCGTC 12351
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || || || || || | |||||||| | || | |||||||| ||
Sbjct 12352 TTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCCTTCTTTGTC 12411
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| ||| || | ||| |||||| | ||| ||||| || | || || ||
Sbjct 12412 TTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAAGGTGATAGT 12471
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| ||||||| || | ||| ||||||||
Sbjct 12472 TTTTCCGGTTAGCGTAATTTGAAAAATTTGCAT 12504
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| || ||||| ||||| |||||| ||||| || || ||| | || ||| ||||
Sbjct 12065 AAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCT 12124
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|| |||||||| || || || || || | ||||||||| | || | |||||||||||||
Sbjct 12125 TCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGGATACCTTCTTTATCT 12184
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|||||| ||| || | | | || || | || || || || | ||| || |||
Sbjct 12185 TGGATTTTTGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACTTCTAACGTGATAGTT 12244
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || | || || || || ||||||||
Sbjct 12245 TTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 12276
>seq52934
Length=6696
Score = 118 bits (130), Expect = 8e-22
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 43932 CTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATA 43991
||||||| ||||| |||||| || | |||| |||||||| ||||| || || |
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 43992 TCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAG 44051
|||| ||||||||||| |||| | ||||||||||||| |||||| ||| || |
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 4085
Query 44052 CAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAA 44111
||| |||||| | || || || |||| || || |||||||| |||| || ||||| |
Sbjct 4086 CAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGA 4145
Query 44112 ATATTTGCAT 44121
| || |||||
Sbjct 4146 AGATCTGCAT 4155
>seq28572
Length=14732
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| |||||||||| | || ||||| || || ||||||||||||||||||||
Sbjct 1832 ACCGCCTCTCAATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGA 1891
Query 43954 TA-ATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
| | | || | || || | ||||||||| || || || | ||||||||||| |||
Sbjct 1892 GAGAGTTCTGC-CGTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAG 1950
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | || || |||||| ||||| ||||| | | | || || ||||| |
Sbjct 1951 GAATTCCCTCCTTATCTTGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGA 2010
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| |||| || ||||||||||| ||||| || || || || ||||||||
Sbjct 2011 CTTCGAGGGTGATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 2059
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|||||||| | | | |||||||||| || |||||||| || ||||| ||
Sbjct 2973 CCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAA 3032
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| | | |||| || | |||||| || || || |||| |||||||||||| ||||
Sbjct 3033 AGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGG 3092
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| ||||||||||| ||||||| ||||| | ||| || || ||||| ||
Sbjct 3093 ATGCCTTCTTTATCCTGAATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACT 3152
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||| || || ||||| |||||||| || || || || || |||||
Sbjct 3153 TCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
|||||||||||||| | ||| | ||||| || || ||||||||||| ||||||
Sbjct 2060 ACCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGA 2119
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| || |||| || | |||||| || ||||| || || ||||| || || | ||
Sbjct 2120 GAGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGG 2179
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||| |||||| ||||| ||||| | | | || || ||||| ||
Sbjct 2180 AATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTAC 2239
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||| || || |||||||| |||| || || || || ||||||||
Sbjct 2240 TTCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354430022833128
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