Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq9614 1083 0.0 >seq9614 Length=652 Score = 1083 bits (1200), Expect = 0.0 Identities = 629/648 (97%), Gaps = 0/648 (0%) Strand=Plus/Minus Query 34481 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 34540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593 Query 34541 ATAACCGCCATCGCTGGACTGTCGAAGAGTGCAGGGCCATCAAGGCGGAGTATCAGCAGA 34600 |||||||||||||||||||| |||||||||||| ||| |||||||| ||||| || |||| Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533 Query 34601 AACTCAAAGACCTGCGAAACAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 34660 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473 Query 34661 TCCAGACATGCTCGTTGAAGCATACGGAAACCAGACAGAAGTAGCACGCAGACTGAAATG 34720 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413 Query 34721 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 34780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353 Query 34781 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAGAA 34840 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 293 Query 34841 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 34900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 233 Query 34901 ACCTGATGAAAAAACTGGAGACGATAGGATTCGACACCAAAAAAGACCTGCTTATCTCGG 34960 |||||||||| |||||||| ||||| |||||||||| ||||||||||||||||||||||| Sbjct 232 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 173 Query 34961 TTGGCGATTTGGTTGATCGCGGTACAGAGAACGTCGAATGCCTGGAATTAATCACATTCC 35020 | ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| Sbjct 172 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 113 Query 35021 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 35080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 53 Query 35081 GTGGAAACGTCAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 35128 |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 52 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124696852674660