Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_005841.1
Length=41391
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 228 2e-55
seq19165 183 8e-42
>seq9614
Length=652
Score = 228 bits (252), Expect = 2e-55
Identities = 147/161 (91%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 19319 ATCGCGTCGAACTGATTAATCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 19378
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 19379 ATAACCGCCATCGCTGGACTATCGAAGAATGCAAAGCGATTAAGGCGGAGTATCAGCAGA 19438
|||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| || ||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 19439 AACTTAAAGACCTGCGTGACAGCAGAAGAGAGGCAGCATGA 19479
|||| ||||||||||| | |||||||| ||||| ||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGA 492
Score = 93.3 bits (102), Expect = 1e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 19689 GAGGCCGCATGACACACACTATCAAAACCATTCCAGACATGCTCATTGAGACATACGGAA 19748
||||||||||||| | | | ||||||||||||||||||||| |||| ||||||||||
Sbjct 503 GAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGAAACATACGGAA 444
Query 19749 ACCAGACAGAAGTAGCCAGGCGATTGTCGTGCCATCGAAACACAGTCAGGCGTTATCTGT 19808
| |||||||||||||| | || || || ||| || ||||| || |
Sbjct 443 ATCAGACAGAAGTAGCACGCAGACTGAAATGTAGTCGCGGTACGGTCAGAAAATACGTTG 384
Query 19809 ACGACAAAGAAGCCAGGTATCACGCCATCGTTAACGGCGTTTTAATGATTCATC 19862
| || ||||| | | ||||||||||| |||| |||| | ||| ||||||
Sbjct 383 ATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTTCTCATGGTTCATC 330
>seq19165
Length=1007
Score = 183 bits (202), Expect = 8e-42
Identities = 113/121 (93%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 5549 TTTTGCTGCTTCAAGCTCAAAGCGCAGCTTACCTACCGTAAGCGCAATATCCTCGTTCTC 5608
|||||||| ||||||||||| ||||| || ||||| || ||||||||||||||||||||
Sbjct 431 TTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTC 372
Query 5609 CTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTGCCAGCAC 5668
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 371 CTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 312
Query 5669 A 5669
|
Sbjct 311 A 311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132203280314196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |