Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq9614 109 3e-19 >seq9614 Length=652 Score = 109 bits (120), Expect = 3e-19 Identities = 203/291 (70%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 80802 ATCGACGGTACCAAATACAGGAATGTCTGGGTTGTTGGTGATCTGCATGGTTGCTACACC 80861 || || || | ||||||| | ||| | ||||| ||||| |||||||| || |||||||| Sbjct 293 ATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACG 234 Query 80862 AGACTGATGTCCGAACTCCAT-CGTGTGGATTTTGACCCGGCGCAGGATTTACTGATATC 80920 | |||||| | |||| || || |||||| ||| | || | || || || Sbjct 233 AACCTGATGAACAAACTGGATACGATTGGATTC-GACAACAAAAAAGACCTGCTTATCTC 175 Query 80921 GGTCGGCGACCTTATCGATCGCGGTACTGAAAATGTCGAATGTCTGGAACTATTGCAGAT 80980 ||| ||||| | | ||||| ||| | || || || ||||| |||||| || | || || Sbjct 174 GGTGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAAT-CACAT 116 Query 80981 GCCC-TGGTTCAGGGCAGTGATGGGGAACCATGAGCGGTTGATGCTCGATGCGTTA--AG 81037 ||| |||||||| || || || |||||||||| ||||| | |||| ||| || Sbjct 115 TCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAG 56 Query 81038 TCCTGATGGCAACGTGAATAACTGGCTAATGAATGGCGGACAATGGTTCTT 81088 | ||| ||||| ||| ||||||| | |||||||| |||||||| Sbjct 55 AGC--GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 302938119147906