Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 109 3e-19
>seq9614
Length=652
Score = 109 bits (120), Expect = 3e-19
Identities = 203/291 (70%), Gaps = 8/291 (3%)
Strand=Plus/Minus
Query 80802 ATCGACGGTACCAAATACAGGAATGTCTGGGTTGTTGGTGATCTGCATGGTTGCTACACC 80861
|| || || | ||||||| | ||| | ||||| ||||| |||||||| || ||||||||
Sbjct 293 ATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACG 234
Query 80862 AGACTGATGTCCGAACTCCAT-CGTGTGGATTTTGACCCGGCGCAGGATTTACTGATATC 80920
| |||||| | |||| || || |||||| ||| | || | || || ||
Sbjct 233 AACCTGATGAACAAACTGGATACGATTGGATTC-GACAACAAAAAAGACCTGCTTATCTC 175
Query 80921 GGTCGGCGACCTTATCGATCGCGGTACTGAAAATGTCGAATGTCTGGAACTATTGCAGAT 80980
||| ||||| | | ||||| ||| | || || || ||||| |||||| || | || ||
Sbjct 174 GGTGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAAT-CACAT 116
Query 80981 GCCC-TGGTTCAGGGCAGTGATGGGGAACCATGAGCGGTTGATGCTCGATGCGTTA--AG 81037
||| |||||||| || || || |||||||||| ||||| | |||| ||| ||
Sbjct 115 TCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAG 56
Query 81038 TCCTGATGGCAACGTGAATAACTGGCTAATGAATGGCGGACAATGGTTCTT 81088
| ||| ||||| ||| ||||||| | |||||||| ||||||||
Sbjct 55 AGC--GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTT 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 302938119147906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |