Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq53791 100 3e-16 >seq53791 Length=16609 Score = 100 bits (110), Expect = 3e-16 Identities = 152/212 (72%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 164492 TaaaaaaaT-TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGC 164550 |||||| | |||| ||||| || |||| || || || || | |||||||| ||| Sbjct 6129 TAAAAACTTGTAGGATGTAAGCACGTAAAGGGTATATTGTTGTACGGACCTCCGGGTACT 6070 Query 164551 GGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAA 164607 ||||||||||| |||||||| |||| ||| | || ||| || || || ||| Sbjct 6069 GGTAAAACATTGATGGCTCGTCAAATTGG-CAAAATGTTGAATGCTCGAGAACCA--AAA 6013 Query 164608 ATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGA 164667 ||||| || |||||| || ||||| |||| ||||| || || || ||||| || || | Sbjct 6012 ATTGTAAACGGTCCTCAAATATTGGACAAGTATGTTGGAGAATCTGAAGCCAACATTCGT 5953 Query 164668 AAGTTGTTTCAGGAGGCTGAAGAAGAACAAAA 164699 |||||| || |||||||||||| |||| Sbjct 5952 CGATTGTTTGCTGACGCTGAAGAAGAAGAAAA 5921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595273252917600