Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq53791 100 3e-16
>seq53791
Length=16609
Score = 100 bits (110), Expect = 3e-16
Identities = 152/212 (72%), Gaps = 7/212 (3%)
Strand=Plus/Minus
Query 164492 TaaaaaaaT-TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGC 164550
|||||| | |||| ||||| || |||| || || || || | |||||||| |||
Sbjct 6129 TAAAAACTTGTAGGATGTAAGCACGTAAAGGGTATATTGTTGTACGGACCTCCGGGTACT 6070
Query 164551 GGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAA 164607
||||||||||| |||||||| |||| ||| | || ||| || || || |||
Sbjct 6069 GGTAAAACATTGATGGCTCGTCAAATTGG-CAAAATGTTGAATGCTCGAGAACCA--AAA 6013
Query 164608 ATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGA 164667
||||| || |||||| || ||||| |||| ||||| || || || ||||| || || |
Sbjct 6012 ATTGTAAACGGTCCTCAAATATTGGACAAGTATGTTGGAGAATCTGAAGCCAACATTCGT 5953
Query 164668 AAGTTGTTTCAGGAGGCTGAAGAAGAACAAAA 164699
|||||| || |||||||||||| ||||
Sbjct 5952 CGATTGTTTGCTGACGCTGAAGAAGAAGAAAA 5921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595273252917600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |