Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq47435 111 8e-20
seq40388 105 3e-18
seq31443 87.8 9e-13
>seq47435
Length=3661
Score = 111 bits (122), Expect = 8e-20
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2126 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 2185
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||||||||
Sbjct 2186 CTGAGCTAATGGGCC 2200
>seq40388
Length=3115
Score = 105 bits (116), Expect = 3e-18
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 2104 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGATGCTCTAACCAA 2045
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||||||||
Sbjct 2044 CTGAGCTAATGGGCC 2030
Score = 93.3 bits (102), Expect = 2e-14
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| ||||||||||| |||| ||||||||||||| || | ||||| |||||
Sbjct 2338 TTGGCCCATGCGAGGATCGAACCCACGACTTTCGCGTTATTAGTACAATGCTCTAACCAA 2279
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 2278 CTGAGCTAATTGGCC 2264
>seq31443
Length=2365
Score = 87.8 bits (96), Expect = 9e-13
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 4 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 53
Lambda K H
0.640 0.410 0.923
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261235015927336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |