Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_006657.1
Length=19820
Score E
Sequences producing significant alignments: (Bits) Value
seq61037 86.0 8e-13
>seq61037
Length=4283
Score = 86.0 bits (94), Expect = 8e-13
Identities = 291/450 (65%), Gaps = 5/450 (1%)
Strand=Plus/Plus
Query 12778 TTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAACACCCCT 12837
|||||| | || ||||| ||||| ||||| | ||||| |||||||||| |||
Sbjct 1296 TTTAAAAAGGGGCACATCTGGACCAGAGGTACCTCGGATTTTGCTTTCAAAAACAGACCT 1355
Query 12838 GAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttttCAAGCAA 12897
| ||| | ||| || ||||| || | || || | ||||| | | |||||||||
Sbjct 1356 TATGATGATTTCGAAGATGTGGTGGCGACACGGAAGGTACAACAAATCACGTTCAAGCAA 1415
Query 12898 CCGTTCCAGTGAAACTGCAGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAGTATCACA 12957
| | ||||| |||| ||| || ||| || ||| || | |||||||||||| |
Sbjct 1416 CTGCTCCAGCAAAACACAAGCGCCATTAGTTATCCCTGTGTTGGTTGCAGTAGTATCAAA 1475
Query 12958 GCATAGAGCTTTAATAAAGTCTGGAATTCCCCAATC-ATTAATAGCGTCAAACATTGCAT 13016
||| |||||||| | | | | |||||||| | |||| || || || | |||
Sbjct 1476 GCAGCATGCTTTAATTTCGGTTTGCAAGCCCCAATCGACTAAT-GCTTCGAATACAGCAG 1534
Query 13017 CAGCTTGCGACTGACCTGTTCCATCATCTAGTACTGGGATCGCTAATATTTTTTCAATTT 13076
||||||| ||||| ||| |||| |||| || | |||| | |||| ||
Sbjct 1535 TGGCTTGCGCTCTCCCTGTCCCAGATTCTAAAGCTGGAATTTCCAATAACTGCTCAACTT 1594
Query 13077 GCCCACAACTCAATACAACTGGTAGTCGTTCTTTATTTTTT---CCACTTGACGTTTTTA 13133
||||||| | | || | || || || || ||| | | || || | | | |
Sbjct 1595 CCCCACAAGTTATTATTATGGGAAGGCGATCGACATTCTCTCAGCCTGTTAATGATGGAA 1654
Query 13134 AAATTTTTCCATCCCAGTGAAGAACACTAGCATTCAAGTCTTGAGTTTTGAAAAGTTCTT 13193
| ||| ||||||||||| | || || ||||| | || |||||| |||||
Sbjct 1655 GCAGTTTACCATCCCAGTGCACTACTGCGGCTTTCAATACATGGCCTTTGAACCATTCTT 1714
Query 13194 TGATTTGTTTTACTTTCTCTTCACGGATTT 13223
| || | |||| ||||| ||| | |||||
Sbjct 1715 TAATCTCTTTTGCTTTCATTTCTCTGATTT 1744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 63246759779194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |