Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq61037 86.0 8e-13 >seq61037 Length=4283 Score = 86.0 bits (94), Expect = 8e-13 Identities = 291/450 (65%), Gaps = 5/450 (1%) Strand=Plus/Plus Query 12778 TTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAACACCCCT 12837 |||||| | || ||||| ||||| ||||| | ||||| |||||||||| ||| Sbjct 1296 TTTAAAAAGGGGCACATCTGGACCAGAGGTACCTCGGATTTTGCTTTCAAAAACAGACCT 1355 Query 12838 GAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttttCAAGCAA 12897 | ||| | ||| || ||||| || | || || | ||||| | | ||||||||| Sbjct 1356 TATGATGATTTCGAAGATGTGGTGGCGACACGGAAGGTACAACAAATCACGTTCAAGCAA 1415 Query 12898 CCGTTCCAGTGAAACTGCAGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAGTATCACA 12957 | | ||||| |||| ||| || ||| || ||| || | |||||||||||| | Sbjct 1416 CTGCTCCAGCAAAACACAAGCGCCATTAGTTATCCCTGTGTTGGTTGCAGTAGTATCAAA 1475 Query 12958 GCATAGAGCTTTAATAAAGTCTGGAATTCCCCAATC-ATTAATAGCGTCAAACATTGCAT 13016 ||| |||||||| | | | | |||||||| | |||| || || || | ||| Sbjct 1476 GCAGCATGCTTTAATTTCGGTTTGCAAGCCCCAATCGACTAAT-GCTTCGAATACAGCAG 1534 Query 13017 CAGCTTGCGACTGACCTGTTCCATCATCTAGTACTGGGATCGCTAATATTTTTTCAATTT 13076 ||||||| ||||| ||| |||| |||| || | |||| | |||| || Sbjct 1535 TGGCTTGCGCTCTCCCTGTCCCAGATTCTAAAGCTGGAATTTCCAATAACTGCTCAACTT 1594 Query 13077 GCCCACAACTCAATACAACTGGTAGTCGTTCTTTATTTTTT---CCACTTGACGTTTTTA 13133 ||||||| | | || | || || || || ||| | | || || | | | | Sbjct 1595 CCCCACAAGTTATTATTATGGGAAGGCGATCGACATTCTCTCAGCCTGTTAATGATGGAA 1654 Query 13134 AAATTTTTCCATCCCAGTGAAGAACACTAGCATTCAAGTCTTGAGTTTTGAAAAGTTCTT 13193 | ||| ||||||||||| | || || ||||| | || |||||| ||||| Sbjct 1655 GCAGTTTACCATCCCAGTGCACTACTGCGGCTTTCAATACATGGCCTTTGAACCATTCTT 1714 Query 13194 TGATTTGTTTTACTTTCTCTTCACGGATTT 13223 | || | |||| ||||| ||| | ||||| Sbjct 1715 TAATCTCTTTTGCTTTCATTTCTCTGATTT 1744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63246759779194