Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 156 1e-33
seq19165 125 2e-24
>seq9614
Length=652
Score = 156 bits (172), Expect = 1e-33
Identities = 119/141 (84%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 42440 CGCATAGGGATTGCAGCAGTAGACGAAATCGAATCTGACCATAAGCGGCATCGCTGGACT 42499
||||| ||| | ||||||||||||||||||||| ||||||| || ||||||||||||
Sbjct 632 CGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACCATAACCGCCATCGCTGGACT 573
Query 42500 ACCGAAGAGTGCAAAGCGATTAAGGCGGAGTATCAGCAGAAGCTTAAAGACCTGCGTGAC 42559
| |||||||||||| ||||| ||||| ||||| || ||||| || ||||||||||| |
Sbjct 572 ATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGAAACTCAAAGACCTGCGAAAT 513
Query 42560 AGCAGAAGCGAGGCAGCATGA 42580
|||||||| ||||| ||||||
Sbjct 512 AGCAGAAGTGAGGCCGCATGA 492
Score = 98.7 bits (108), Expect = 3e-16
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 42790 GAGGCCGCATGACACACACTGTCAAAACCATTCCAGACATGCTCATAGAGACATACGGAA 42849
||||||||||||| | | || ||||||||||||||||||||| | || ||||||||||
Sbjct 503 GAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGAAACATACGGAA 444
Query 42850 ACCAGACAGAAGTAGCACG 42868
| |||||||||||||||||
Sbjct 443 ATCAGACAGAAGTAGCACG 425
>seq19165
Length=1007
Score = 125 bits (138), Expect = 2e-24
Identities = 86/97 (89%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 30067 TTTTGCTGCTTCCAGCTCAACTCGCAGCTTCCCAACCGTAAGCGCAATATCCTCGTTCTC 30126
|||||||| ||| |||||||| ||||| ||||| || || ||||||||||||||||||||
Sbjct 431 TTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTC 372
Query 30127 CTGGTCGCGGAGTTTGATGTATTGCTGTTTTTTATCC 30163
|||||||||| |||||||||||||||| ||| | |||
Sbjct 371 CTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCC 335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149815252148184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |