Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq13914 149 8e-31
seq7792 136 5e-27
seq59517 123 3e-23
seq19381 123 3e-23
>seq13914
Length=11729
Score = 149 bits (164), Expect = 8e-31
Identities = 166/221 (75%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387
|||||||| |||| ||| ||| || || ||||| ||||||||||| | ||||||
Sbjct 7888 TCGTCTCTTGATATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTTTA 7947
Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447
||||||||||| | ||| || |||||||||||| || ||||| || |||||||| ||
Sbjct 7948 AGCCAAAATATCGCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCAGCAAAAGCT 8007
Query 33448 ATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCC 33504
|| | ||| |||||| || ||| |||||| ||||||||| ||||| || ||
Sbjct 8008 ATGATTCTTTCTCCAAAAGTCGCGTTTTTGTCATTTATCCACTTCAACGCCCAGTCAGCT 8067
Query 33505 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545
|| | || ||||| ||||| ||||| |||||||| || ||
Sbjct 8068 TTTCTCTTAACACACGGCATGGTTTCAATGGCATTGAATAG 8108
Score = 122 bits (134), Expect = 1e-22
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623
|||||||| ||||| || ||||| | || |||||||| ||||| | || ||||| |
Sbjct 8198 ATCTTTAATGTAAGTGTCAATCAACAAGCTGTACATTTCTGAATGTACATTCTCAATTGT 8257
Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683
|| ||||||||||| ||| |||| || || | ||| ||||||||| |||| || ||
Sbjct 8258 GATTTGAAATCCGTAAAAAAATCTGGCTTCAGGAATTTGTACTTCTTGGAAAAAACGCTC 8317
Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743
| ||||||||||| || || || ||| ||| || ||||| || || || || ||
Sbjct 8318 GACTAAATTTTCATTAACGATACCATCAGAGGCAGCGAAAAATGCTAAAACGTGGGAAAT 8377
Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33788
|| | || || || ||| | ||||| | |||||| ||| |||
Sbjct 8378 GAATTTCTTCTCTTCGGGTTTCAGTTTTTCCCAATCTCTGAAATC 8422
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/200 (70%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191
||||||||| || || ||||| ||||| |||||||| | ||||| |||||||| || |
Sbjct 7615 CAATCTATCAGCTACAAATTCAATATACGTTTTCATTAATTCACTGTTCATTCCAATCAT 7674
Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
|| || | ||| |||| | |||||||||||||||| || || || |||||
Sbjct 7675 CGATACGGGCAAAGCATCAGTCAAAAATTCTTGTTCAATGATAACGGCGTCACGAATAAT 7734
Query 33252 AGATCTAACGGTTTCTT---CACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308
| | |||||| |||| ||| || | |||||||| |||||||| || ||
Sbjct 7735 ---TTCGGTGATTTCTTCAACACTGGGTTTTTGAACCAAATGTTTGAACATCAAGCAAGC 7791
Query 33309 GAAATCGCAGTGCAGACCCT 33328
|||||| || | |||||
Sbjct 7792 AAAATCGGTATGTAAACCCT 7811
>seq7792
Length=27931
Score = 136 bits (150), Expect = 5e-27
Identities = 156/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 33340 ATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 33399
|||| |||||| || || | ||| ||||||||||| ||||||||||||||||||||
Sbjct 19189 ATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTTTAAGCCAAAATATT 19248
Query 33400 GAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCT 33459
| ||| || ||| ||||||||||| ||||| || |||||||| || || | || |||
Sbjct 19249 GCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACGCTATGATCCTTTCT 19308
Query 33460 CCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 33516
||| || || | ||| |||||| || ||||| || || ||||| || |||
Sbjct 19309 CCAAAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTGCTTTCTTCTTAACA 19368
Query 33517 CAAGGCATCGTTTCTATGGCATTAAAGAG 33545
|||||||| ||||| || ||||| || ||
Sbjct 19369 CAAGGCATTGTTTCAATAGCATTGAACAG 19397
Score = 125 bits (138), Expect = 9e-24
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 33555 TTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614
|||| || ||| || || || || || ||||| | ||| |||||||| ||||||| ||
Sbjct 19476 TTCAGTAGGATCCTTGACGTATGTGTCTATCAATAAACTGTACATTTCTGAATGAACATT 19535
Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674
|| |||| ||||||||||||||||| ||||||| |||| || || |||||| | |
Sbjct 19536 CTCTATGGTGATCTGAAATCCGTAGAAGAATCTAGCTTCGGGGATTTGAACTTCTTGAAA 19595
Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734
|| || || | |||||||||||||| || |||||| || || ||||| || | ||
Sbjct 19596 GAAGCGCTCGACTAAATTTTCATTCACGATACCGTCAGATGCGGCGAAAAATGCAAGAAC 19655
Query 33735 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33788
|| || || | || || || ||| | ||||| | ||| || ||| |||
Sbjct 19656 GTGCGAAATGAACTTCTTCTCTTCGGGTTTCAGTTTCTCCCAGTCTCTGAAATC 19709
Score = 86.0 bits (94), Expect = 8e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 33800 CTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCAT 33859
|||||||||| ||||||||||||| || |||||||||||| ||||| ||| || ||||
Sbjct 19789 CTACTTCTTCAGCTGTCCAAAATGAAGCTTCTGCCTTTTTAAACATGGCCCAAATATCAT 19848
Query 33860 AATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGG 33899
|||| ||||| | || ||||||||| ||||| ||
Sbjct 19849 CGTATTTAATTGGCATTATTACAAATCTACGAGGATTAGG 19888
>seq59517
Length=19559
Score = 123 bits (136), Expect = 3e-23
Identities = 139/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395
||| ||||||||||||||||| |||| | ||| || || || ||||| ||||| |
Sbjct 14730 TACCTGAAATTCTCCAGACAAGACTCGTCTAGTATACATGTTTGAAGTATAAGGTTCGAA 14671
Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455
|| ||||||||||| |||||||||||||| || || || |||||||| || | | ||
Sbjct 14670 AGATTCATTATTTCCTAAAATTTGAGCAGTGGAAGCGGTAGGCATAGGAGCAAGAAGTAG 14611
Query 62456 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62515
| |||||||| |||||| | | ||||| ||||||| | | ||||| ||| | |||
Sbjct 14610 AGAATTTCTAACGCCGTATTGTTTAATTTTTTCTTTTAACGATGTCCAATCCCATAAATC 14551
Query 62516 CGACGG 62521
|| ||
Sbjct 14550 AGATGG 14545
Score = 102 bits (112), Expect = 1e-16
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677
||| | || | |||||| |||||||| || || || | || || | | || || ||
Sbjct 13019 GCACTGAAAAGGGTAGGCGAAGCGTGAGTGAAATATCTCTCCGATAACAAGTTATAAGTT 12960
Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737
||||| |||| ||| ||||| |||||||||||| || || ||||| ||||| ||
Sbjct 12959 TCAATCGCTGCGTCGATATCTTCAGCATGAATTCCTACAGCAACTCGCATCAACATATGT 12900
Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63793
|| || | ||| || | || |||||||||||| || || ||||||||||||||
Sbjct 12899 TGTGGGCGTTCTACAACTTTTCCGTTTATTTTCAATAAATACGATTTTTCCAAAGT 12844
Score = 95.1 bits (104), Expect = 2e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 62918 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGT 62977
|||||||| || | | ||||| | || ||||| || | |||||||| || |||||
Sbjct 13922 TACCTCATCAGGAGCACTATATTCGACGATTTCAGTACACAAATTACTACTTTTAATAGT 13863
Query 62978 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 63037
|||||||||||| ||||| ||| | ||||| ||||| || || | ||| | || ||
Sbjct 13862 TCCTAAATTTTGATGATTGGATTTTCTATTACAGGCATCTTTGTACAACATGTAAGGTGT 13803
Query 63038 ACCAGTTTCAATCTGAGATTCTATAATCGC 63067
|| |||||||| ||||| |||| ||| ||
Sbjct 13802 TCCTGTTTCAATTTGAGAGTCTAAAATTGC 13773
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121
|||| ||||| |||||||| || | | ||||| | |||| || || || ||||
Sbjct 15144 TCCAGCCGTAGAAATGCATCGAAGTCAAAGTCGAATAGTTTGGATTCGCCATGTGTATAT 15085
Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181
| | | ||| |||||| ||||| ||||| | || ||||||||||| | || || |
Sbjct 15084 TTAAACTTTGCGATTGATCAATGAAAGCTCCACGATCGGCAGCCATTTTCAAGACGGTTT 15025
Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62230
||||| ||||||||| | ||||||||| | ||| ||| | ||| |||||
Sbjct 15024 TTTGTTTAATTTCCCATACAGTTTTATACAGCTC-CTTCAAATCATCTGG 14976
>seq19381
Length=19756
Score = 123 bits (136), Expect = 3e-23
Identities = 140/186 (75%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG--AAAGTAGATTGTA 63673
||||||| ||||||||||||||||| || ||||| || |||||| | | || ||| ||
Sbjct 8694 CCGCATTGAATAAGGTAGGAGAAGCATGAGTAAA--ATATTTCAGGGACATTAAATTATA 8637
Query 63674 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63733
|| |||||| | ||||| ||||| ||||| || || || || ||||| |||||
Sbjct 8636 GGTTTCAATAACAGAGTCGATATCTTCGCCGTGAATACCAACGGCAACTCGCATCAACAT 8577
Query 63734 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63793
|||||| || | ||| || || ||||| |||||||| | ||||||||||||| |||
Sbjct 8576 GTGCTGTGGACGTTCGACAATACGATTGTTGATTTTCAATAGATAGGATTTTTCCAGAGT 8517
Query 63794 TTTAAA 63799
| |||
Sbjct 8516 CTGAAA 8511
Score = 113 bits (124), Expect = 6e-20
Identities = 205/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 63164 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63223
|||||| ||||||| | ||||||||||| ||| | | | || | | || | | |
Sbjct 9211 CAATCCGGGACATTGACTGGGACACATCAAACTCCATTTTTCATCTTTTTCGACCCTTCT 9152
Query 63224 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63283
||| || || || ||||| | || ||||| ||| || | | | || || ||
Sbjct 9151 CATGAATTCGTCGGGGATCCACATTGCGTAAAATAAATCCCTAGCGCGAGACTCTTCTTT 9092
Query 63284 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63343
|| | ||| ||| || || | || | | |||||| | |||||| |||||||||||
Sbjct 9091 ACCAGAATTTTTTCGCAGCTCTAAAAATTCAAAAATATCCGCATGCCAAGGTTCCAAGTA 9032
Query 63344 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63403
|| || | | | || || | |||||| ||||| || || | |||||| || ||||||||
Sbjct 9031 AATAGCAAAAGCACCCGGTCTTTTGTTGCCTCCTTGGTCCACGTATCTGGCTGTGTTATT 8972
Query 63404 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCT 63463
|| || | | ||| ||||| | ||| ||||||| || || || || | |||||||||
Sbjct 8971 GTATACGCGAAGCATCGGAATTAGACCATTTGATACGCCGTTTGTTCCAGCGATATAGCT 8912
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 62553 CCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCA 62612
|| |||||| | ||| ||| | || || | ||||| || | || | ||| |||||
Sbjct 10026 CCTTTACTGACTGGCGAACCTTCGTAGGTTTTATATGGACCGTATTTTTGAGCAAGTTCG 9967
Query 62613 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT 62672
|| ||||| ||||||||||||||||| | |||||| || |||| ||| || |||
Sbjct 9966 CAGCTCGCTTCTAATGCACCGTAATACAAGGTTTCAAAAATCTGTACATTAAGTAATTGC 9907
Query 62673 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACA 62732
| | ||| ||||||||| | | | ||||| ||| ||||||||||||| |
Sbjct 9906 GACTGTTCGCTTTCAAATGGAAGTCTCATCAAGATAAATAGGTCGGCTAATCCTTGAATA 9847
Query 62733 CCAATACCGATAGGTCTATG 62752
|| || || || ||||||||
Sbjct 9846 CCTATTCCAATCGGTCTATG 9827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622321247079760
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