Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 156 4e-33
seq63578 111 2e-19
>seq28572
Length=14732
Score = 156 bits (172), Expect = 4e-33
Identities = 174/230 (76%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || |||||||| ||||| || ||| | ||||| ||||| | || | | |
Sbjct 3199 ATGCAGATCTTCGTAAAAACCTTAACCGGCAAAACCATCACTCTCGAAGTCGAGCCTAGC 3140
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| ||| ||| || |||||||| || ||||| || ||
Sbjct 3139 GACACGATTGAAAACGTCAAGGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGACCAG 3080
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGTCAGCGACTATAA 26947
||| | || |||| || ||| |||||||||||||||| ||||| || | | ||||||||
Sbjct 3079 CAACGTCTGATTTTCGCCGGTAAACAACTCGAAGATGGTAGAACACTTTCG-GACTATAA 3021
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||| ||||||||||||||| | ||| |||| || | || ||||||||||
Sbjct 3020 CATCCAAAAAGAATCTACTTTACATTTGGTTCTCCGTCTCAGAGGAGGAA 2971
Score = 131 bits (144), Expect = 2e-25
Identities = 168/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | || || || || || ||||| ||| |||| || ||||| | || | |
Sbjct 2972 AATGCAAATCTTCGTCAAGACCTTGACTGGTAAAACGATTACACTCGAAGTTGAGCCTAG 2913
Query 26828 CGACACCATCGAGCAAGTCAAA--CAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||| || || | ||||| ||||| | | || ||||| || || || ||||||
Sbjct 2912 CGACACTATTGAAAACGTCAAGGCCAAAATACAA--GATAAAGAGGGAATTCCACCCGAT 2855
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|||||| | ||||| | || ||||||||||||||||||| |||| || ||||||
Sbjct 2854 CAACAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGAAGAACTCTCTCTGACTAT 2795
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||||||||| || | ||| | ||||| || | ||||| ||
Sbjct 2794 AACATCCAAAAAGAATCGACCCTTCATTTAGTCCTTCGATTGAGAGGTGG 2745
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| |||| || ||| | ||||| ||||| |||| | |
Sbjct 2287 ATGCAAATCTTCGTTAAAACCCTAACGGGTAAAACCATCACTCTCGAAGTAGAGCCCAGT 2228
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| || || || || ||||| || || || ||||||
Sbjct 2227 GACACCATCGAAAACGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCCCCAGATCAA 2168
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| | |||||||||||||||||||| ||| | || ||| || ||
Sbjct 2167 CAACGTTTAATTTTTGCCGGCAAACAACTCGAAGATGGCCGAACCCTCTCCGATTACAAT 2108
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||| ||||| ||| | ||||| || || || | ||||||||
Sbjct 2107 ATTCAAAAGGAATCAACTTTACATCTCGTGCTTCGATTGAGAGGAGG 2061
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| ||||| || ||| | |||||| ||||| | || | |
Sbjct 2059 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAAACAATCACCCTCGAAGTCGAGCCTAGT 2000
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | ||||| || || || || || || || ||||| || ||
Sbjct 1999 GACACAATCGAAAATGTCAAGGCCAAAATCCAAGATAAGGAGGGAATTCCTCCAGACCAG 1940
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | ||||||| || ||| |||||||||||||| | |||| || || |||||
Sbjct 1939 CAACGTCTCATTTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTCTCGGATTATAAT 1880
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||||||||| ||| | ||| | ||||| || | ||||| ||
Sbjct 1879 ATTCAAAAAGAATCGACTCTTCATTTAGTCCTCCGATTGAGAGGCGG 1833
Score = 116 bits (128), Expect = 4e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| |||||||| ||| | ||||| ||||| |||| | |
Sbjct 2743 ATGCAGATTTTCGTCAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTAGAGCCCAGT 2684
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| || ||| || || || || || || || ||||||
Sbjct 2683 GACACCATCGAAAATGTCAAGGCTAAAATTCAGGATAAGGAGGGAATTCCCCCTGATCAA 2624
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| || ||| |||||||||||||| | ||| | ||| || |||
Sbjct 2623 CAACGTTTAATTTTCGCCGGTAAACAACTCGAAGACGGCCGAACTCTTTCCGATTACAAC 2564
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
|| ||||||||||| || | ||| |||| || | || |||||||||
Sbjct 2563 ATCCAAAAAGAATCGACATTACATTTGGTTCTCCGTCTCCGAGGAGGAA 2515
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || || || ||| |||| || ||||| | ||| | | |
Sbjct 1831 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAAACGATTACTCTCGAAGTCGAACCTAGC 1772
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| ||||||||||| || |||||||||||
Sbjct 1771 GACACCATCGAAAACGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAG 1712
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| || ||| || || || ||||||| ||||| | || || ||
Sbjct 1711 CAACGTTTAATTTTCGCCGGAAAGCAGCTTGAAGATGGTAGAACTCTTTCGGATTACAAT 1652
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|| || ||||| || || | ||| |||| || ||||| | || || ||
Sbjct 1651 ATCCAGAAAGAGTCGACGCTGCATTTGGTGTTGCGACTTCGTGGTGGCAA 1602
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|||||||| | || |||||||| || ||||| ||| | |||||| ||||| | ||| |
Sbjct 3430 AAAATGCAGATCTTCGTAAAAACGTTGACTGGTAAAACCATCACCCTCGAAGTTGAACCG 3371
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
| || || ||||| | ||||| || ||| || || ||||| || ||||| |||
Sbjct 3370 AGTGATACGATCGAAAACGTCAAGGCGAAAATTCAAGATAAGGAAGGTATTCCTCCTGAT 3311
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|||||| | || || | || || || ||||||||||| | ||| | ||| ||
Sbjct 3310 CAACAACGTCTGATCTTCGCTGGAAAGCAACTCGAAGACGGCCGAACGCTTTCCGATTAC 3251
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || ||||| ||||| ||| | ||| |||| || || | ||||| ||
Sbjct 3250 AATATCCAAAAGGAATCGACTTTACATTTGGTTCTTCGATTGAGAGGTGG 3201
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | || || || || |||||||| ||| | ||||| |||| | || | |
Sbjct 2516 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATCACACTCGAGGTCGAGCCTAG 2457
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
||||| ||||| | ||||| || ||| || || || || || || || |||||
Sbjct 2456 TGACACGATCGAAAATGTCAAGGCCAAAATTCAAGATAAGGAGGGAATTCCCCCTGATCA 2397
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
||| | || || | | || |||||||||||||||| |||| | ||||||||
Sbjct 2396 GCAACGTCTTATCTTTGCTGGTAAACAACTCGAAGATGGAAGAACTCTTTCGGACTATAA 2337
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||| ||||||||||| || | ||| | || || || | ||||| ||
Sbjct 2336 CATCCAAAAAGAATCGACATTGCATTTAGTTCTCCGATTGAGAGGTGG 2289
>seq63578
Length=26733
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| |||||| | || |||||||| | || |||||| | || || | ||| | ||| |
Sbjct 12736 CAAGATGCAAATCTTCGTAAAAACTCTTACCGGAAAAACCATTACTTTGGAAGTTGAACC 12677
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| ||| || ||||| | |||||| |||||| || |||||||| || || || ||
Sbjct 12676 ATCCGATACGATCGAAAACGTCAAAGCCAAGATTCAAGATAAAGAAGGAATCCCACCTGA 12617
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| ||| | | |||| | ||| |||||| | ||||||| | | | ||||||||
Sbjct 12616 CCAGCAACGGTTAATTTTTGCCGGTAAACAATTGGAAGATGGCCGCACATTGAGCGACTA 12557
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| |||||||||||||| || | ||| |||||||
Sbjct 12556 CAATATTCAAAAAGAATCGACGCTTCATTTGGTCCT 12521
Score = 102 bits (112), Expect = 8e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||| || || |||| |||||| | |||||| | ||| | ||| |
Sbjct 12504 ATGCAAATTTTTCAAATTACGCTAACCGGAAAAACTATCACCTTGGAAGTGGAACCGTCT 12445
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || || || | || ||| || ||| ||||||||||| || || ||||| ||
Sbjct 12444 GATACTATTGAAAACGTGAAAGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 12385
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | |||| || ||| |||||| | ||||| | | | | | | ||||| |||||
Sbjct 12384 CAGAGATTAATTTTCGCCGGTAAACAATTGGAAGACGGTCGTACCTTGAGCGATTATAAT 12325
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
|| ||||||||||| ||| | ||| | || | | ||| |||| ||||
Sbjct 12324 ATCCAAAAAGAATCCACTCTTCATTTAGTTTTACGTCTTCGAGGTGGAA 12276
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || |||||||| | || || ||| | ||||| | ||| |||| || |
Sbjct 12048 ATGCAAATTTTCGTAAAAACGCTCACCGGTAAAACTATCACGTTGGAAGTAGAGCCATCC 11989
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || |||||| | || ||| |||||| ||||||||||| || || ||||| ||
Sbjct 11988 GATACAATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATTCCACCCGACCAG 11929
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || ||| |||||| | ||||| | | | | ||||| || ||
Sbjct 11928 CAGCGATTAATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACGTTAAGCGATTACAAT 11869
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTC 26978
|| ||||| ||||| || | ||| |||||
Sbjct 11868 ATCCAAAAGGAATCCACCCTACATTTGGTC 11839
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| | ||||||||| | || ||| | || | ||| | |
Sbjct 11820 ATGCAAATTTTCGTTAAAACGCTCACTGGAAAAACCATAACCTTGGAGGTGGAACCGTCC 11761
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | |||||| || ||| || |||||||| ||||| || || ||
Sbjct 11760 GATACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGCATACCACCAGACCAG 11701
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| || | || | | ||| ||||| | ||||||| | | | || || ||||||
Sbjct 11700 CAACGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGTACTCTGAGTGATTATAAC 11641
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||||| |||||||| ||| | || |||| || ||| | | || ||||
Sbjct 11640 ATTCAGAAAGAATCCACTCTTCACTTGGTACTCAGATTACGTGGTGGAA 11592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478181428053920
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