Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq54470 141 2e-28
seq19381 100 7e-16
>seq54470
Length=54847
Score = 141 bits (156), Expect = 2e-28
Identities = 248/353 (70%), Gaps = 10/353 (3%)
Strand=Plus/Minus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
||| |||||||| |||||||||||||| |||||| | ||||| || || || ||||||
Sbjct 48714 AGGCGATCTCGGTCCAGTTTACGGATTCCAATGGAGACACTTCGGAGCTGAGTACAAAGA 48655
Query 111548 CATGCACGACTCATA-TGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAA 111606
||||||| | || | || ||| | | |||||| | || |||||||||||| |
Sbjct 48654 TATGCACGCCGATTACTCCAACAAAGGCATC-GATCAACTGCAAAATGTCATTGATACCA 48596
Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGG 111666
|||| || ||||| | | | || ||| | | || ||||| || | ||
Sbjct 48595 TTAAAAATAACCCCGACGATAGAAGAATAATTTTATGCGCTTGGAATCCGTTAGATTTAC 48536
Query 111667 AAAAAATGGCACTTCCACCATGTCA-TCTTATGTGCCAGTTTTA---TGTACACGACGGG 111722
|| ||||| || || || ||||| | || |||| ||||||| ||| | | ||
Sbjct 48535 CCAAGATGGCCCTACCTCCTTGTCACTGTTTAGTGC-AGTTTTACGCTGTTAATGGCGA- 48478
Query 111723 ATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAAT 111782
|| | || || ||||||||||| || ||||| ||||| ||| | || || || ||||||
Sbjct 48477 AT--TATCGTGTCAAATGTATCAACGTTCTGCCGATATGGGTTTAGGAGTACCTTTTAAT 48420
Query 111783 ATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAA 111835
|| || |||||| | ||||| |||| | | ||||| ||| |||| |||| |||
Sbjct 48419 ATCGCCAGTTACTCCCTACTCACTTACATGATCGCACATGTTACTAATCACAA 48367
>seq19381
Length=19756
Score = 100 bits (110), Expect = 7e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 364117 AAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTAC 364176
||||| |||||||| || | || || || || || |||||||| || ||||||||||||
Sbjct 9360 AAGCTTTGGTTTGCTATATTAGACTCTCAAATAGAAACAGGAACGCCTTATATGTTGTAC 9419
Query 364177 AAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAAC 364236
|||||| | || || || || |||||||| | | ||||| || ||| | ||||||
Sbjct 9420 AAAGATGCCTGTAATCGTAAATCCAACCAAAAAAATCTTGGAACTATTAAAAGTAGCAAC 9479
Query 364237 CTATGTACCGAGATTATTGAATA 364259
|| ||||| || || || |||||
Sbjct 9480 CTGTGTACGGAAATCATGGAATA 9502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302011216661852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |