Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 140 3e-28
seq63578 123 2e-23
seq77090 96.9 3e-15
seq46443 96.9 3e-15
>seq28572
Length=14732
Score = 140 bits (154), Expect = 3e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || || || || || ||||| ||| ||||||| ||||||| ||| | |
Sbjct 2972 AATGCAAATCTTCGTCAAGACCTTGACTGGTAAAACGATTACACTCGAAGTTGAGCCTAG 2913
Query 24050 CGACACCATCGAGCAAGTCAAA--CAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
|||||| || || | ||||| ||||| | | || ||||| || || || ||||||
Sbjct 2912 CGACACTATTGAAAACGTCAAGGCCAAAATACAA--GATAAAGAGGGAATTCCACCCGAT 2855
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
||||| | || || | || ||||| ||||||||||||| |||| || || |||
Sbjct 2854 CAACAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGAAGAACTCTCTCTGACTAT 2795
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||||||||| || |||||||||| | |||||||||| ||
Sbjct 2794 AACATCCAAAAAGAATCGACCCTTCATTTAGTCCTTCGATTGAGAGGTGG 2745
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || |||||||| ||||| || ||| | || || ||||||||||| | | |
Sbjct 3199 ATGCAGATCTTCGTAAAAACCTTAACCGGCAAAACCATCACTCTCGAAGTCGAGCCTAGC 3140
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| ||| ||| || ||||||||||| ||||| || ||
Sbjct 3139 GACACGATTGAAAACGTCAAGGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGACCAG 3080
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGTCAGCGATTATAA 24169
|| | ||||||| || ||| || ||||||||||||| |||| || | | || |||||
Sbjct 3079 CAACGTCTGATTTTCGCCGGTAAACAACTCGAAGATGGTAGAACACTTTCG-GACTATAA 3021
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||| |||||||||||||| | ||||| || | | | |||||||||
Sbjct 3020 CATCCAAAAAGAATCTACTTTACATTTGGTTCTCCGTCTCAGAGGAGGA 2972
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| ||||| || ||| | || ||| ||||||||||| | |
Sbjct 2059 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAAACAATCACCCTCGAAGTCGAGCCTAGT 2000
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | ||||| || || || || || || || ||||| || ||
Sbjct 1999 GACACAATCGAAAATGTCAAGGCCAAAATCCAAGATAAGGAGGGAATTCCTCCAGACCAG 1940
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | || |||| || ||| || ||||||||||| | ||||| || ||||||||
Sbjct 1939 CAACGTCTCATTTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTCTCGGATTATAAT 1880
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||||| || |||||||||| | |||||||||| ||
Sbjct 1879 ATTCAAAAAGAATCGACTCTTCATTTAGTCCTCCGATTGAGAGGCGG 1833
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| |||| || ||| | || || ||||||| ||| |||
Sbjct 2287 ATGCAAATCTTCGTTAAAACCCTAACGGGTAAAACCATCACTCTCGAAGTAGAGCCCAGT 2228
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| || || || || ||||| || || || ||||||
Sbjct 2227 GACACCATCGAAAACGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCCCCAGATCAA 2168
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | | |||| | |||||| ||||||||||||| | ||| | || |||||| ||
Sbjct 2167 CAACGTTTAATTTTTGCCGGCAAACAACTCGAAGATGGCCGAACCCTCTCCGATTACAAT 2108
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||| || | ||| | ||| | |||||||||||||
Sbjct 2107 ATTCAAAAGGAATCAACTTTACATCTCGTGCTTCGATTGAGAGGAGG 2061
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|||||||| | || |||||||| || ||||| ||| | || ||| ||||||| || |
Sbjct 3430 AAAATGCAGATCTTCGTAAAAACGTTGACTGGTAAAACCATCACCCTCGAAGTTGAACCG 3371
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
| || || ||||| | ||||| || ||| || || ||||| || ||||| |||
Sbjct 3370 AGTGATACGATCGAAAACGTCAAGGCGAAAATTCAAGATAAGGAAGGTATTCCTCCTGAT 3311
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
||||| | ||||| | || || |||||||||||||| | | ||| | ||||||
Sbjct 3310 CAACAACGTCTGATCTTCGCTGGAAAGCAACTCGAAGACGGCCGAACGCTTTCCGATTAC 3251
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || ||||| ||||| || | ||||| || | |||||||||| ||
Sbjct 3250 AATATCCAAAAGGAATCGACTTTACATTTGGTTCTTCGATTGAGAGGTGG 3201
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || ||| ||||||| |||||||||| | | |
Sbjct 1831 ATGCAAATCTTCGTTAAGACCTTGACCGGTAAAACGATTACTCTCGAAGTCGAACCTAGC 1772
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||||||||| || |||||||||||
Sbjct 1771 GACACCATCGAAAACGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAG 1712
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | | |||| || ||| ||||| || ||||||| |||| | ||||| ||
Sbjct 1711 CAACGTTTAATTTTCGCCGGAAAGCAGCTTGAAGATGGTAGAACTCTTTCGGATTACAAT 1652
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| || ||||| || || | ||||| |||||
Sbjct 1651 ATCCAGAAAGAGTCGACGCTGCATTTGGTGTT 1620
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| |||||||| ||| | || || ||||||| ||| |||
Sbjct 2743 ATGCAGATTTTCGTCAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTAGAGCCCAGT 2684
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| || ||| || || || || || || || ||||||
Sbjct 2683 GACACCATCGAAAATGTCAAGGCTAAAATTCAGGATAAGGAGGGAATTCCCCCTGATCAA 2624
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | | |||| || ||| || ||||||||||| | | ||| | |||||| |||
Sbjct 2623 CAACGTTTAATTTTCGCCGGTAAACAACTCGAAGACGGCCGAACTCTTTCCGATTACAAC 2564
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199
|| ||||||||||| ||| | ||||| ||
Sbjct 2563 ATCCAAAAAGAATCGACATTACATTTGGT 2535
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || || || || |||||||| ||| | || || |||| |||||| | |
Sbjct 2516 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATCACACTCGAGGTCGAGCCTAG 2457
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| ||||| | ||||| || ||| || || || || || || || |||||
Sbjct 2456 TGACACGATCGAAAATGTCAAGGCCAAAATTCAAGATAAGGAGGGAATTCCCCCTGATCA 2397
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|| | || || | | || || ||||||||||||| |||| | || |||||
Sbjct 2396 GCAACGTCTTATCTTTGCTGGTAAACAACTCGAAGATGGAAGAACTCTTTCGGACTATAA 2337
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| ||||||||||| ||| | |||||||| | |||||||||| ||
Sbjct 2336 CATCCAAAAAGAATCGACATTGCATTTAGTTCTCCGATTGAGAGGTGG 2289
>seq63578
Length=26733
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || || ||||| ||||| || || | |||||| | |||||||| |
Sbjct 11593 AATGCAAATTTTCGTGAAAACTTTAACCGGCAAGACTATTACCTTGGAAGTCGAACCGTC 11534
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||| ||||||||| | || ||| || ||| || |||||||| || || || || ||
Sbjct 11533 CGATACCATCGAGAACGTGAAAGCTAAAATTCAAGATAAAGAAGGTATCCCGCCTGACCA 11474
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|||||| |||||| || || |||||| | ||||||| | | | | |||||||||||
Sbjct 11473 GCAGAGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACGTTAAGCGATTATAA 11414
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
||||| || || || || ||||||| || ||
Sbjct 11413 TATTCAGAAGGAGTCCACCCTTCATTTGGTTTT 11381
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||| || || |||| |||||| | || ||| | ||||| || |
Sbjct 12504 ATGCAAATTTTTCAAATTACGCTAACCGGAAAAACTATCACCTTGGAAGTGGAACCGTCT 12445
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || || | || ||| || ||| |||||||||||||| || ||||| ||
Sbjct 12444 GATACTATTGAAAACGTGAAAGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 12385
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|||||| | |||| || ||| || ||| | ||||| | | | | | |||||||||||
Sbjct 12384 CAGAGATTAATTTTCGCCGGTAAACAATTGGAAGACGGTCGTACCTTGAGCGATTATAAT 12325
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203
|| ||||||||||| || |||||||||| |||
Sbjct 12324 ATCCAAAAAGAATCCACTCTTCATTTAGTTTTA 12292
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || |||||||| | || || ||| | || || | ||||| ||| | |
Sbjct 12048 ATGCAAATTTTCGTAAAAACGCTCACCGGTAAAACTATCACGTTGGAAGTAGAGCCATCC 11989
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || |||||| | || ||| |||||| ||||||||||| || || ||||| ||
Sbjct 11988 GATACAATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATTCCACCCGACCAG 11929
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| || | |||| || ||| || ||| | ||||| | | | | | |||||||| ||
Sbjct 11928 CAGCGATTAATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACGTTAAGCGATTACAAT 11869
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203
|| ||||| ||||| || | ||||| || |||
Sbjct 11868 ATCCAAAAGGAATCCACCCTACATTTGGTCTTA 11836
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| | ||||||||| | || ||| | || || || | |
Sbjct 11820 ATGCAAATTTTCGTTAAAACGCTCACTGGAAAAACCATAACCTTGGAGGTGGAACCGTCC 11761
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || | |||||| || ||| || |||||||||||||| || || ||
Sbjct 11760 GATACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGCATACCACCAGACCAG 11701
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| || |||| | | ||| || || | ||||||| | | | | || |||||||||
Sbjct 11700 CAACGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGTACTCTGAGTGATTATAAC 11641
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATT 24208
||||| |||||||| || |||| || || | |||||
Sbjct 11640 ATTCAGAAAGAATCCACTCTTCACTTGGTACTCAGATT 11603
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| |||||| | || |||||||| | || |||||| | ||||| | ||||| || |
Sbjct 12736 CAAGATGCAAATCTTCGTAAAAACTCTTACCGGAAAAACCATTACTTTGGAAGTTGAACC 12677
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||| || ||||| | |||||| |||||| || |||||||| || || || ||
Sbjct 12676 ATCCGATACGATCGAAAACGTCAAAGCCAAGATTCAAGATAAAGAAGGAATCCCACCTGA 12617
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|| || | | |||| | ||| || ||| | ||||||| | | | | ||||| ||
Sbjct 12616 CCAGCAACGGTTAATTTTTGCCGGTAAACAATTGGAAGATGGCCGCACATTGAGCGACTA 12557
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199
|| |||||||||||||| || ||||||| ||
Sbjct 12556 CAATATTCAAAAAGAATCGACGCTTCATTTGGT 12524
>seq77090
Length=20911
Score = 96.9 bits (106), Expect = 3e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151
|||||| ||||| |||||||| | |||||| || || |||||||| ||||||| |
Sbjct 10507 AGGCATTCCTCCTGATCAACAACGTTTGATTTTCGCTGGTAAGCAACTTGAAGATGGACG 10566
Query 24152 AAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAG 24211
|| | ||||| ||||| ||||||||||| || | |||||||||||| |||||||
Sbjct 10567 AACTCTTTCTGATTACAACATCCAAAAAGAATCGACGTTACATTTAGTGTTACGATTGAG 10626
Query 24212 AGGAGG 24217
||| ||
Sbjct 10627 AGGTGG 10632
>seq46443
Length=17015
Score = 96.9 bits (106), Expect = 3e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151
|||||| ||||| || ||||| | |||||| | || || ||||||||||||| |
Sbjct 12820 AGGCATTCCTCCTGACCAACAACGTTTGATTTTTGCTGGTAAACAACTCGAAGATGGACG 12761
Query 24152 AAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAG 24211
| | | |||||||||||| |||||||||||||| | |||||||| || ||||||||
Sbjct 12760 TACCCTTTCCGATTATAACATCCAAAAAGAATCTACTCTGCATTTAGTATTGAGATTGAG 12701
Query 24212 AGGAGG 24217
||| ||
Sbjct 12700 AGGTGG 12695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429514789819830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |