Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 138 1e-27
seq28572 116 3e-21
seq59517 86.0 6e-12
>seq63578
Length=26733
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| | || ||||||| ||| || |||||||| || |||||||||||
Sbjct 11822 CCACCGCGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTT 11881
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || | || || || ||| | ||||| ||||||||||| || ||
Sbjct 11882 AACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGA 11941
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| ||| | | |||| | | | ||| | ||||||| | ||| |
Sbjct 11942 ATACCTTCTTTGTC-TTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTAC 12000
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||||||||| || |||||||||||||| |||||
Sbjct 12001 TTCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||| || || ||||| | ||||| || |||||||| ||||| ||||||
Sbjct 12506 CCGCCGCGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTC 12565
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || | || || || || | ||||| || |||||||| || |||
Sbjct 12566 AATGTGCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGG 12625
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||||||||||| || ||| | | || |||| | || | ||||||| | || |
Sbjct 12626 ATTCCTTCTTTATC-TTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAAC 12684
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| |||||| ||||| |||||||||||||| || |||||
Sbjct 12685 TTCCAAAGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| |||||||| | || ||||| || ||||||||||| ||||||
Sbjct 12050 CCACCACGTAGACGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTC 12109
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || |||| || || || ||| | ||||| | |||||||| || |||
Sbjct 12110 AAAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGG 12169
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| |||||||| || |||||| ||| || | | || | || || | | ||||
Sbjct 12170 ATACCTTCTTTATCTTGGATTTT-TGCTTTTACATTTTCGATTGTGTCAGATGGTTCGAC 12228
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||| || || || ||||| |||||||| |||||
Sbjct 12229 TTCTAACGTGATAGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 12276
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| | |||||||| | || || || ||||| || || |||||||||
Sbjct 12278 CCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTC 12337
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || | || || || ||| | ||||| | ||||||||| || |||
Sbjct 12338 AAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGG 12397
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| ||| ||| || || | | || | |||||| | | || |
Sbjct 12398 ATGCCTTCTTTGTC-TTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCAC 12456
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||||| |||||||| || || ||||| |||||
Sbjct 12457 TTCCAAGGTGATAGTTTTTCCGGTTAGCGTAATTTGAAAAATTTGCAT 12504
>seq28572
Length=14732
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| || || || ||||||| ||||| |||||||| || |||||||||
Sbjct 3201 CCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAA 3260
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || || ||||| || ||| |||| | ||| || || || |||||
Sbjct 3261 AGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGA 3320
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || |||||| ||||| | || | ||||| | | || |
Sbjct 3321 ATACCTTCCTTATCTTGAATTTTCGCCTTGACGTTTTCGATCGTATCACTCGGTTCAACT 3380
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||||||||| || | ||||||||||| ||||||||
Sbjct 3381 TCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCAT 3427
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | |||| ||| ||||| | |||||||| || || || ||||||||
Sbjct 1604 GCCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGA 1663
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || | || || |||||||| || ||| | |||||||| ||||| || |||||
Sbjct 1664 AAGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGG 1723
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||||||||||||||| ||| || ||||| | || | || ||| | | ||||
Sbjct 1724 GATTCCTTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGAC 1783
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||||||||||| | || || ||||| || |||||
Sbjct 1784 TTCGAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | ||| || ||||| | ||||| || || ||||||||||| |||||||||
Sbjct 2061 CCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAG 2120
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || || || || || ||||| || | |||||||| || || || || ||
Sbjct 2121 AGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGA 2180
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| || || |||||| ||||| | || | || || ||| ||| |
Sbjct 2181 ATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACT 2240
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||||||||| ||||| ||||| ||||| || |||||
Sbjct 2241 TCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || ||||||| ||||| || ||||| ||||||||||||
Sbjct 2517 CCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAA 2576
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || || || || || ||| | |||||||| || || || || ||
Sbjct 2577 AGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGA 2636
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || || || ||||| ||||| | || | || || ||| ||| |
Sbjct 2637 ATTCCCTCCTTATCCTGAATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTACT 2696
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||||||||| |||| ||||| ||||||||||||||
Sbjct 2697 TCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 105 bits (116), Expect = 6e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078
||| || || ||||||| || || || ||||| ||||| || || | || |
Sbjct 2984 ACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACC 3043
Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138
|| || || || || || ||| | || | ||| ||||||||||||||||| ||||||||
Sbjct 3044 ATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTT 3103
Query 131139 GTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAA 131197
|| ||| ||| || ||||| | || | || ||| | | ||||| |||| || |
Sbjct 3104 ATC-CTGAATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGA 3162
Query 131198 CGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||||| ||||||| ||||||||||| ||||||||
Sbjct 3163 TGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
>seq59517
Length=19559
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 145064 ACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCAAAA 145123
|||||||| || || | ||| || || | ||||| ||| || || | ||||| |||
Sbjct 14729 ACCTGAAATTCTCCAGACAAGACTCGTCTAGTATACATGTTTGAAGTATAAGGTTCGAAA 14670
Query 145124 GACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAATAAT 145183
|| || ||||| || | |||||||| || | ||||| ||||| || | | ||
Sbjct 14669 GATTCATTATTTCCTAAAATTTGAGCAGTGGAAGCGGTAGGCATAGGAGCAAGAAGTAGA 14610
Query 145184 GAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAA 145243
||||| | | ||||| | || || | ||| |||| || ||||||||||| |
Sbjct 14609 GAATTTCTAACGCCGTATTGTTTAATTTTTTCTTTTAACGATGTCCAATCCCATAAATCA 14550
Query 145244 GTCGGCCTCACGTCCCACATGTCGTACTGCAAAAT 145278
| ||| |||| |||||| ||||||||||||||
Sbjct 14549 GATGGCTGGACGTTCCACATATCGTACTGCAAAAT 14515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471538509738240
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