Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq13914 145 1e-29
seq7792 136 5e-27
seq59517 129 7e-25
seq19381 127 3e-24
>seq13914
Length=11729
Score = 145 bits (160), Expect = 1e-29
Identities = 165/221 (75%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744
|||||||| |||||||| ||| || || ||||| ||||||||||| | ||||||
Sbjct 7888 TCGTCTCTTGATATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTTTA 7947
Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 32804
||||||||||| | ||||| ||||||||||||||| ||||| || || ||||| ||
Sbjct 7948 AGCCAAAATATCGCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCAGCAAAAGCT 8007
Query 32805 ATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCC 32861
|| | ||| |||||| || ||| |||||| ||||||||| ||||| || ||
Sbjct 8008 ATGATTCTTTCTCCAAAAGTCGCGTTTTTGTCATTTATCCACTTCAACGCCCAGTCAGCT 8067
Query 32862 TTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902
|| | || ||||| ||||| || || || ||||| || ||
Sbjct 8068 TTTCTCTTAACACACGGCATGGTTTCAATGGCATTGAATAG 8108
Score = 127 bits (140), Expect = 3e-24
Identities = 163/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980
|||||||| || || |||||||| | || |||||||| ||||| | || ||||| |
Sbjct 8198 ATCTTTAATGTAAGTGTCAATCAACAAGCTGTACATTTCTGAATGTACATTCTCAATTGT 8257
Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040
|||||||||||||| || |||| || || | ||| ||||||||| |||| || ||
Sbjct 8258 GATTTGAAATCCGTAAAAAAATCTGGCTTCAGGAATTTGTACTTCTTGGAAAAAACGCTC 8317
Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100
||||||||||||| || || || ||| ||| || ||||| || || || || ||
Sbjct 8318 GACTAAATTTTCATTAACGATACCATCAGAGGCAGCGAAAAATGCTAAAACGTGGGAAAT 8377
Query 33101 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33145
|| | || || || ||| | ||||| | |||||| ||| |||
Sbjct 8378 GAATTTCTTCTCTTCGGGTTTCAGTTTTTCCCAATCTCTGAAATC 8422
Score = 95.1 bits (104), Expect = 2e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548
||||||||| || |||||||| ||||| |||||||| | ||||| |||||||| || |
Sbjct 7615 CAATCTATCAGCTACAAATTCAATATACGTTTTCATTAATTCACTGTTCATTCCAATCAT 7674
Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608
|| || | ||| |||| | ||||||||||||||| || ||||| |||||
Sbjct 7675 CGATACGGGCAAAGCATCAGTCAAAAATTCTTGTTCAATGATAACGGCGTCACGAATAAT 7734
Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 32668
| | | ||| |||| ||| | | |||||||| |||||||| || || ||
Sbjct 7735 TTCGGTGATTTCTTCAACACTGGGTTTTTGAACCAAATGTTTGAACATCAAGCAAGCAAA 7794
Query 32669 ATCGCAGTGTAGACCCT 32685
|||| |||| |||||
Sbjct 7795 ATCGGTATGTAAACCCT 7811
Score = 86.0 bits (94), Expect = 8e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 32353 GAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTAC 32412
|| |||| ||||| |||| | |||||| || || | ||| || || ||||| |||||||
Sbjct 7395 GAAACATGACTCCACTTTTCTTGTATTCGCCTACTCTTTTCTCAAAGAAATTCGTTTTAC 7454
Query 32413 CTTCTAATGATATATTTTCCATGAAATCGAATGGATT 32449
| | || |||||||||||||| ||||||||||| ||
Sbjct 7455 CGTTTAGAGATATATTTTCCATAAAATCGAATGGGTT 7491
>seq7792
Length=27931
Score = 136 bits (150), Expect = 5e-27
Identities = 156/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 32697 ATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 32756
||||||||||| || || | ||| ||||||||||| ||||||||||||||||||||
Sbjct 19189 ATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTTTAAGCCAAAATATT 19248
Query 32757 GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCT 32816
| ||||| ||| |||||||| || ||||| || || ||||| || || | || |||
Sbjct 19249 GCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACGCTATGATCCTTTCT 19308
Query 32817 CCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 32873
||| || || | ||| |||||| || ||||| || || ||||| || |||
Sbjct 19309 CCAAAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTGCTTTCTTCTTAACA 19368
Query 32874 CAAGGCATTGTCTCTATAGCATTAAAGAG 32902
||||||||||| || |||||||| || ||
Sbjct 19369 CAAGGCATTGTTTCAATAGCATTGAACAG 19397
Score = 134 bits (148), Expect = 2e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 32912 TTCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971
|||| || ||| || || ||||| || ||||| | ||| |||||||| ||||||| ||
Sbjct 19476 TTCAGTAGGATCCTTGACGTATGTGTCTATCAATAAACTGTACATTTCTGAATGAACATT 19535
Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031
|| |||| || ||||||||||||||| ||||||| |||| || || |||||| | |
Sbjct 19536 CTCTATGGTGATCTGAAATCCGTAGAAGAATCTAGCTTCGGGGATTTGAACTTCTTGAAA 19595
Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091
|| || || |||||||||||||||| || |||||| || || ||||| || | ||
Sbjct 19596 GAAGCGCTCGACTAAATTTTCATTCACGATACCGTCAGATGCGGCGAAAAATGCAAGAAC 19655
Query 33092 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33145
|| || || | || || || ||| | ||||| | ||| || ||| |||
Sbjct 19656 GTGCGAAATGAACTTCTTCTCTTCGGGTTTCAGTTTCTCCCAGTCTCTGAAATC 19709
Score = 84.2 bits (92), Expect = 3e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 32356 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 32415
|||||||||| |||| | ||||| || || | |||||||| ||||| |||||||| |
Sbjct 18703 ACATAACTCCACTTTTCTTATATTCTCCAACTCTCTTTTCGAAGAAATTCGTTTTACCAT 18762
Query 32416 CTAATGATATATTTTCCATGAAATCGAATGGATT 32449
|| |||||||||||||| |||||||| || ||
Sbjct 18763 TCAAGGATATATTTTCCATAAAATCGAAAGGGTT 18796
Score = 82.4 bits (90), Expect = 1e-10
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218
|||||||| ||||||||||||| || |||||||||||| |||| ||| || ||||
Sbjct 19791 ACTTCTTCAGCTGTCCAAAATGAAGCTTCTGCCTTTTTAAACATGGCCCAAATATCATCG 19850
Query 33219 TATTGAATTGGAAAAATAACAAATCTATTTGGATT 33253
|||| |||||| | || ||||||||| |||||
Sbjct 19851 TATTTAATTGGCATTATTACAAATCTACGAGGATT 19885
>seq59517
Length=19559
Score = 129 bits (142), Expect = 7e-25
Identities = 140/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250
||| ||||||||||||||||| |||| | ||| || || || ||||| ||||| |
Sbjct 14730 TACCTGAAATTCTCCAGACAAGACTCGTCTAGTATACATGTTTGAAGTATAAGGTTCGAA 14671
Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310
||| ||||||||||| |||||||||||||| || || || |||||||| || | | ||
Sbjct 14670 AGATTCATTATTTCCTAAAATTTGAGCAGTGGAAGCGGTAGGCATAGGAGCAAGAAGTAG 14611
Query 62311 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62370
| |||||||| |||||| | | ||||| ||||||| | | ||||| ||| | |||
Sbjct 14610 AGAATTTCTAACGCCGTATTGTTTAATTTTTTCTTTTAACGATGTCCAATCCCATAAATC 14551
Query 62371 CGACGG 62376
|| ||
Sbjct 14550 AGATGG 14545
Score = 105 bits (116), Expect = 8e-18
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532
||| | || | |||||| ||||||||||| || || | || || | | || || ||
Sbjct 13019 GCACTGAAAAGGGTAGGCGAAGCGTGAGTGAAATATCTCTCCGATAACAAGTTATAAGTT 12960
Query 63533 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63592
||||| |||| ||| ||||| |||||||||||| || || ||||| ||||| ||
Sbjct 12959 TCAATCGCTGCGTCGATATCTTCAGCATGAATTCCTACAGCAACTCGCATCAACATATGT 12900
Query 63593 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648
|| || | ||| || | || |||||||||||| || || ||||||||||||||
Sbjct 12899 TGTGGGCGTTCTACAACTTTTCCGTTTATTTTCAATAAATACGATTTTTCCAAAGT 12844
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 62773 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 62832
|||||||| || | | ||||| | || ||||| || | |||||||| || || ||
Sbjct 13922 TACCTCATCAGGAGCACTATATTCGACGATTTCAGTACACAAATTACTACTTTTAATAGT 13863
Query 62833 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 62892
|||||||||||| ||||| ||| | ||||| ||||| || || | ||| | || ||
Sbjct 13862 TCCTAAATTTTGATGATTGGATTTTCTATTACAGGCATCTTTGTACAACATGTAAGGTGT 13803
Query 62893 ACCAGTTTCAATCTGAGATTCTATAATCGC 62922
|| |||||||| ||||| |||| ||| ||
Sbjct 13802 TCCTGTTTCAATTTGAGAGTCTAAAATTGC 13773
Score = 84.2 bits (92), Expect = 3e-11
Identities = 122/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
|||| ||||| |||||||| || | | ||||| | |||| || || || ||||
Sbjct 15144 TCCAGCCGTAGAAATGCATCGAAGTCAAAGTCGAATAGTTTGGATTCGCCATGTGTATAT 15085
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
| | | ||| |||||| ||||| ||||| | || ||||||||||| | | || |
Sbjct 15084 TTAAACTTTGCGATTGATCAATGAAAGCTCCACGATCGGCAGCCATTTTCAAGACGGTTT 15025
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62085
||||| ||||||||| | ||||||||| | ||| ||| | ||| |||||
Sbjct 15024 TTTGTTTAATTTCCCATACAGTTTTATACAGCTC-CTTCAAATCATCTGG 14976
>seq19381
Length=19756
Score = 127 bits (140), Expect = 3e-24
Identities = 141/186 (76%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 63471 CCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAG--AAAGTAGATTGTA 63528
||||||| ||||||||||||||||| |||||||| || |||||| | | || ||| ||
Sbjct 8694 CCGCATTGAATAAGGTAGGAGAAGCATGAGTAAA--ATATTTCAGGGACATTAAATTATA 8637
Query 63529 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588
|| |||||| | ||||| ||||| ||||| || || || || ||||| |||||
Sbjct 8636 GGTTTCAATAACAGAGTCGATATCTTCGCCGTGAATACCAACGGCAACTCGCATCAACAT 8577
Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648
|||||| || | ||| || || ||||| |||||||| | ||||||||||||| |||
Sbjct 8576 GTGCTGTGGACGTTCGACAATACGATTGTTGATTTTCAATAGATAGGATTTTTCCAGAGT 8517
Query 63649 TTTAAA 63654
| |||
Sbjct 8516 CTGAAA 8511
Score = 104 bits (114), Expect = 3e-17
Identities = 203/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078
|| ||| ||||||| | ||||||||||| ||| | | | || | | || | | |
Sbjct 9211 CAATCCGGGACATTGACTGGGACACATCAAACTCCATTTTTCATCTTTTTCGACCCTTCT 9152
Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138
||| || || || ||||| | || ||||| ||| || | | | || || ||
Sbjct 9151 CATGAATTCGTCGGGGATCCACATTGCGTAAAATAAATCCCTAGCGCGAGACTCTTCTTT 9092
Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198
|| | ||| ||| || || | || | | |||||| | |||||| |||||||||||
Sbjct 9091 ACCAGAATTTTTTCGCAGCTCTAAAAATTCAAAAATATCCGCATGCCAAGGTTCCAAGTA 9032
Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258
|| || | | | || || | |||||| ||||| || || | |||||| || ||||||||
Sbjct 9031 AATAGCAAAAGCACCCGGTCTTTTGTTGCCTCCTTGGTCCACGTATCTGGCTGTGTTATT 8972
Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318
|| || | | ||| ||||| | |||||| ||| || || || || | |||||||||
Sbjct 8971 GTATACGCGAAGCATCGGAATTAGACCATTTGATACGCCGTTTGTTCCAGCGATATAGCT 8912
Score = 95.1 bits (104), Expect = 2e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 62408 CCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCA 62467
|| |||||| | ||| ||| | || || | ||||| || | || | ||| |||||
Sbjct 10026 CCTTTACTGACTGGCGAACCTTCGTAGGTTTTATATGGACCGTATTTTTGAGCAAGTTCG 9967
Query 62468 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGC 62527
|| ||||| ||||||||||||||||| | |||||| || |||| ||| || ||||
Sbjct 9966 CAGCTCGCTTCTAATGCACCGTAATACAAGGTTTCAAAAATCTGTACATTAAGTAATTGC 9907
Query 62528 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 62587
| | ||| ||||||||| | | | ||||| ||| ||||||||||||| |
Sbjct 9906 GACTGTTCGCTTTCAAATGGAAGTCTCATCAAGATAAATAGGTCGGCTAATCCTTGAATA 9847
Query 62588 CCAATACCGATAGGTCTATG 62607
|| || || || ||||||||
Sbjct 9846 CCTATTCCAATCGGTCTATG 9827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632995310725600
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