Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 187 5e-42
seq63578 176 8e-39
seq46443 89.7 9e-13
seq77090 84.2 4e-11
>seq28572
Length=14732
Score = 187 bits (206), Expect = 5e-42
Identities = 184/235 (78%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
|||||| || || ||||| ||||| ||||| || ||||| |||||||| ||||| || ||
Sbjct 1598 TTAATTGCCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTA 1657
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||| || || || || |||||||| | |||||| |||||||| || | | ||| || ||
Sbjct 1658 ATCCGAAAGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATC 1717
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-G 68406
||| || || ||||| |||||||| ||||| ||||||||| ||||||||||| ||| |
Sbjct 1718 GGGAGGGATTCCTTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTC-GCTAG 1776
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| ||||| | || || ||||| || || | |||||| ||||| || |||||
Sbjct 1777 GTTCGACTTCGAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 165 bits (182), Expect = 1e-35
Identities = 176/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| | || || | ||||| |||| || || ||||||||||||||||| || |
Sbjct 2971 TTCCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCG 3030
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| ||||| || |||||||| | || || |||||||| || || | ||| ||||| || |
Sbjct 3031 AAAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAG 3090
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
| |||||||| || || ||||| |||||||||||| || || ||||| ||| | ||
Sbjct 3091 GGATGCCTTCTTTATCCTGAATTTTTGCCTTGACGTTTTCAATCGTGTC-GCTAGGCTCG 3149
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| | ||||||||||| || || | ||| || ||||| ||||||||
Sbjct 3150 ACTTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| || || || | ||||| |||| || || |||||||||||||| |||||||
Sbjct 2515 TTCCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGG 2574
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || ||||| | || || |||||||| || | | |||||| || || |
Sbjct 2575 AAAGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGG 2634
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| || ||||| || ||||| || |||||||| ||||||||||| | ||||
Sbjct 2635 GAATTCCCTCCTTATCCTGAATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTA 2694
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| | ||||||||||| || || | ||| |||||||| ||||||||
Sbjct 2695 CTTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 152 bits (168), Expect = 9e-32
Identities = 162/211 (77%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|| || || || || || ||||||||||||||||| || ||||| || || ||||||||
Sbjct 2763 ACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAGAGAGTTCTTCCATCTTCG 2822
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| || || || ||||| ||||| | |||||| ||||||||||| || || || |||||
Sbjct 2823 AGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCTTGT 2882
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTT 68431
|| || ||||||||| || || ||||| ||| | || ||||| | || || |||||
Sbjct 2883 ATTTTGGCCTTGACGTTTTCAATAGTGTC-GCTAGGCTCAACTTCGAGTGTAATCGTTTT 2941
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | |||||||||||| || ||||||
Sbjct 2942 ACCAGTCAAGGTCTTGACGAAGATTTGCATT 2972
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| |||| || || || |||||||| || |||||||| || || | || |||||
Sbjct 3219 ACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCG 3278
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || ||||| || || | |||||| || || ||||| |||||||| ||||||
Sbjct 3279 AGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGA 3338
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || ||||||||| ||||| || || | ||| ||||| | ||||||||||||
Sbjct 3339 ATTTTCGCCTTGACGTTTTCGATCGTATCACTCGGTTCAACTTCGAGGGTGATGGTTTTA 3398
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | || || ||||| |||||||||
Sbjct 3399 CCAGTCAACGTTTTTACGAAGATCTGCATT 3428
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|||| || || || ||||| || || ||||||||||| || | |||||||| | ||
Sbjct 2085 TGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCTTCGAGTTGT 2144
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| ||||| || || | | |||||| || || ||||| |||||||| ||||| || ||
Sbjct 2145 TTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCTTGGATTTTA 2204
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||||||| ||||||||||| | |||||||| | ||||||||||| |||||
Sbjct 2205 GCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTTACCCGTT 2264
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| || |||||
Sbjct 2265 AGGGTTTTAACGAAGATTTGCAT 2287
Score = 127 bits (140), Expect = 4e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
|| || ||||||||||||||||| || || || || || |||||||| | || || ||
Sbjct 2319 GTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCA 2378
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || || | ||| || || || ||||| || ||||| |||||||| || ||||||
Sbjct 2379 GCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTG 2438
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| ||||| ||||| | || || || | ||||| ||||| || || | ||||
Sbjct 2439 ACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTC 2498
Query 68445 TTGACGAATATCTGCATT 68462
|||||||| || ||||||
Sbjct 2499 TTGACGAAAATTTGCATT 2516
>seq63578
Length=26733
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || || ||||| ||||| ||||| || |||||||| || ||||||
Sbjct 11822 CCACCGCGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTT 11881
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || ||||| || || || |||||||| || | || || ||||||||||||
Sbjct 11882 AACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGA 11941
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| |||||||||||||| || || || |||||| || || | || ||||||
Sbjct 11942 ATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTACT 12001
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| ||||| || ||||| || || ||||| || |||||
Sbjct 12002 TCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || ||||| || || || ||||| |||||||| || ||||| || |||
Sbjct 12050 CCACCACGTAGACGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTC 12109
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||||||||| || || |||||||| || | |||||| |||||||||||
Sbjct 12110 AAAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGG 12169
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| || ||||| || ||||| || || ||||| ||||| | || ||| |||
Sbjct 12170 ATACCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACT 12229
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| |||||||| ||||| || || ||||| || ||||||
Sbjct 12230 TCTAACGTGATAGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCATT 12277
Score = 158 bits (174), Expect = 2e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311
||||||||| || ||||| ||||| || ||||||||||| || || | ||||||||
Sbjct 11611 TACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTC 11670
Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
||||| || ||||| || || | || ||| ||||| ||||| |||||||| || || ||
Sbjct 11671 CAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCCTTCTTTATCCTG 11730
Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431
||| || || ||||| || ||||| || | | ||| || |||||||| ||||||||
Sbjct 11731 AATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCAAGGTTATGGTTTT 11790
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| ||||| || || ||||| || |||||
Sbjct 11791 TCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | ||||| || ||||| || |||||||| || || || |||
Sbjct 12506 CCGCCGCGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTC 12565
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||| | |||||||| || || || ||||| || || | | ||| ||||| |||||
Sbjct 12566 AATGTGCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGG 12625
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| || ||||||||||| || |||||| ||||| || || | || ||| |||
Sbjct 12626 ATTCCTTCTTTATCTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACT 12685
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||||||||| || || || || ||||| || |||||
Sbjct 12686 TCCAAAGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 156 bits (172), Expect = 8e-33
Identities = 161/211 (76%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || || || || || || ||||| ||||||||||| |||||||||
Sbjct 12276 TTCCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGC 12335
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || | || ||||| || || || |||||||| || | ||| || ||||||||||
Sbjct 12336 TCAAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTG 12395
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| |||||||| ||||||||||| || || || ||| || || || || | | ||| |
Sbjct 12396 GGATGCCTTCTTTGTCTTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCA 12455
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGT 68443
||||||||||||| |||||||| || || ||
Sbjct 12456 CTTCCAAGGTGATAGTTTTTCCGGTTAGCGT 12486
Score = 154 bits (170), Expect = 3e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 68230 AATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAAT 68289
||| ||| || ||||| ||||| ||||| || || |||||||| || || || |||||||
Sbjct 11361 AATGTCCGCCACGAAGACGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAAT 11420
Query 68290 CGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349
|| | || | |||||||| || ||||| || ||||| || | ||| || ||||| |
Sbjct 11421 CGCTTAACGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAG 11480
Query 68350 GTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT 68409
| || || ||||| || |||||||| || || || ||| ||||||||| || | | ||
Sbjct 11481 GCGGGATACCTTCTTTATCTTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTT 11540
Query 68410 CTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
| ||||||||||| || || || || || | || || ||||| || ||||||
Sbjct 11541 CGACTTCCAAGGTAATAGTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCATT 11593
>seq46443
Length=17015
Score = 89.7 bits (98), Expect = 9e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
|||||| || || || || || ||||||||||||||||||||||| || || | |||||
Sbjct 12709 CAATACTAAATGCAGAGTAGATTCTTTTTGGATGTTATAATCGGAAAGGGTACGTCCATC 12768
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCT 68360
||| | || || || || || || | | ||||||||| || |||||||||
Sbjct 12769 TTCGAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATGCCT 12820
>seq77090
Length=20911
Score = 84.2 bits (92), Expect = 4e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306
|| || || || |||| ||| || |||||||||||||| ||||| || || || | |||
Sbjct 10620 CGTAACACTAAATGTAACGTCGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCGTCCA 10561
Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCT 68360
||||| | ||||| || ||||| || | | |||||| || || |||||||||
Sbjct 10560 TCTTCAAGTTGCTTACCAGCGAAAATCAAACGTTGTTGATCAGGAGGAATGCCT 10507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920696330771920
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