Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq63578 95.1 9e-15 >seq63578 Length=26733 Score = 95.1 bits (104), Expect = 9e-15 Identities = 166/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | ||||| ||||| ||||| || |||||| ||||| ||| | | Sbjct 11593 AATGCAAATTTTCGTGAAAACTTTAACCGGCAAGACTATTACCTTGGAAGTCGAACCGTC 11534 Query 21893 AGAAACGGTGGCCGATCTT--AAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 || || | | || | | |||| |||| || |||||||| ||| | || || Sbjct 11533 CGATACCATCGA-GAACGTGAAAGCTAAAA-TTCAAGATAAAGAAGGTATCCCGCCTGAC 11476 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||| | || || ||||| || ||| | |||||| || | |||||| Sbjct 11475 CAGCAGAGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACGTTAAGCGATTAT 11416 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAAT 22068 |||||||||||||| || || |||||| |||| || ||| | || || ||| ||| || Sbjct 11415 AATATTCAGAAGGAGTCCACCCTTCATTTGGTTTTGCGTCTTCGTGGCGGACATTGAT 11358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357773943566644