Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq31924 89.7 1e-14 >seq31924 Length=7301 Score = 89.7 bits (98), Expect = 1e-14 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402 || || ||||| | | | || |||||| || ||||||||||||||||| ||||| || Sbjct 2780 CGCGTATTTCCCAAAGTGACCAAATGTACCTTCCACAAATACGGTCCTTCCGGCTCGGTG 2721 Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462 | || | ||| || |||||| | || || ||| | ||||||||||| |||||| | Sbjct 2720 CAGAAATTCGACGGTCTCTGCGTGCTGCCTTTGAATATTGTCAACGAGAAAATCTACGTC 2661 Query 3463 TTCCTCTGGTTCTGGTT 3479 ||| | ||||| ||||| Sbjct 2660 TTCTTATGGTTTTGGTT 2644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12469027311000