Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq54470 125 6e-24
>seq54470
Length=54847
Score = 125 bits (138), Expect = 6e-24
Identities = 231/339 (68%), Gaps = 0/339 (0%)
Strand=Plus/Plus
Query 20242 AGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCC 20301
||||||||| || | ||| ||||| | ||||| || ||||| || |||||||| |||||
Sbjct 48375 AGTAACATGTGCGATCATGTAAGTGAGTAGGGAGTAACTGGCGATATTAAAAGGTACTCC 48434
Query 20302 CAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATA 20361
|||||||| || | || | ||||||| ||||| || | || || | | | | ||
Sbjct 48435 TAAACCCATATCGGCAGAACGTTGATACATTTGACACGATAATTCGCCATTAACAGCGTA 48494
Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421
||| || ||| ||||||| || || || |||||| | || || ||| |||||
Sbjct 48495 AAACTGCACTAAACAGTGACAAGGAGGTAGGGCCATCTTGGGTAAATCTAACGGATTCCA 48554
Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481
|| || | ||| ||||||||||||| || |||||||| || ||| | | |
Sbjct 48555 AGCGCATAAAATTATTCTTCTATCGTCGGGGTTATTTTTAATGGTATCAATGACATTTTG 48614
Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541
|| ||| || | || | | | || || || | | || |||| | || || ||
Sbjct 48615 CAGTTGATCGATGCCTTTGTTGGAGTAATCGGCGTGCATATCTTTGTACTCAGCTCCGAA 48674
Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580
||| ||||| ||||| |||||||| || || | ||| ||
Sbjct 48675 GTGTCTCCATTGGAATCCGTAAACTGGACCGAGATCGCC 48713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440929297576240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |