Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 168 2e-36
seq52934 140 8e-28
seq63578 134 3e-26
>seq28572
Length=14732
Score = 168 bits (186), Expect = 2e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | || ||| || | ||||| || |||||||||||| |||||||| | |
Sbjct 2745 CCACCTCTCAATCGAAGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAG 2804
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||| | |||||| || |||||||| ||||| |||||| |||
Sbjct 2805 AGAGTTCTTCCATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGA 2864
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||| |||||||| || ||||| || || |||||||| |||| ||||| | || |||
Sbjct 2865 ATTCCCTCTTTATCTTGTATTTTGGCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAACT 2924
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| || ||||| || || |||| ||||||||||| || ||||||
Sbjct 2925 TCGAGTGTAATCGTTTTACCAGTCAAGGTCTTGACGAAGATTTGCATT 2972
Score = 168 bits (186), Expect = 2e-36
Identities = 153/193 (79%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||| || |||| ||||| || |||||||| | ||| ||||| |||||
Sbjct 3236 TTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAA 3295
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||||||| |||||| | || || ||||| ||||| || |||||||| || |||||
Sbjct 3296 GATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTCGCCTTGACGTT 3355
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | ||| |||| ||| |||||||| ||||| || || || |||| || || ||
Sbjct 3356 TTCGATCGTATCACTCGGTTCAACTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTTAC 3415
Query 288462 GAATATCTGCATT 288474
||| |||||||||
Sbjct 3416 GAAGATCTGCATT 3428
Score = 140 bits (154), Expect = 8e-28
Identities = 163/219 (74%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317
|| ||| |||||||| | || ||| ||||| ||||| || |||| ||| || || ||
Sbjct 2072 TCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCC 2131
Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374
||||| | |||||| || || || || | ||| |||||| |||||| ||||||||
Sbjct 2132 ATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGA---TCTGGGGGAATTCCTTC 2188
Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434
||||| |||||||| || || |||||||| || | || || | ||||||||||| ||
Sbjct 2189 CTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGT 2248
Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || || || || || || || ||||| || |||||
Sbjct 2249 GATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 140 bits (154), Expect = 8e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| |||||||| | || || | || ||||| | |||||| || |||||
Sbjct 3008 TTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAA 3067
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||||| || || ||||| |||||||||||||| ||||| || || |||||
Sbjct 3068 AATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCCTGAATTTTTGCCTTGACGTT 3127
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | ||||| | || |||||||| ||||| || || ||||| | || || ||
Sbjct 3128 TTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTAC 3187
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 3188 GAAGATCTGCAT 3199
Score = 136 bits (150), Expect = 9e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||| | || || | ||| | || |||||||||||| || || ||||
Sbjct 2516 TCCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGA 2575
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || || |||||||| | |||||| || ||||| || | ||| |||||| | ||
Sbjct 2576 AAGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGG 2635
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
||||| || |||||||| ||||| || || || ||||| || | || || | |||||
Sbjct 2636 AATTCCCTCCTTATCCTGAATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTAC 2695
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||| ||||| || || || || | || |||||||| ||||||||
Sbjct 2696 TTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || |||| | || | ||| | ||| ||||| |||||||| || || |
Sbjct 1605 CCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAA 1664
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || ||||| | || ||||| ||||| || | ||| || ||| |||
Sbjct 1665 AGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGG 1724
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||||||||| || ||||| || || || |||||||| || | ||||| | ||| |||
Sbjct 1725 ATTCCTTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGACT 1784
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||| || ||||||| ||||| ||||| || |||||
Sbjct 1785 TCGAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 123 bits (136), Expect = 6e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| |||||||| | || || | ||| ||||| | |||||| || || ||
Sbjct 2324 TTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCAGCAAA 2383
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| ||||| || ||| | || ||||| || ||||| || ||||| || || || ||
Sbjct 2384 GATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTGACATT 2443
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | || || | || || ||||| ||||| || || || || | ||||||||
Sbjct 2444 TTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTCTTGAC 2503
Query 288462 GAATATCTGCATT 288474
||| || ||||||
Sbjct 2504 GAAAATTTGCATT 2516
>seq52934
Length=6696
Score = 140 bits (154), Expect = 8e-28
Identities = 145/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
||||||||||||| || |||| || || | || ||||| ||||| ||||| |||||||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
||| ||| || || ||||| ||||||||||| || ||||| ||||| || ||||
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 4085
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
| |||| ||| | ||| |||||||| |||||||| || || || || || || ||||
Sbjct 4086 CAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGA 4145
Query 288464 ATATCTGCAT 288473
| ||||||||
Sbjct 4146 AGATCTGCAT 4155
>seq63578
Length=26733
Score = 134 bits (148), Expect = 3e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302
|||||| || || || | | || | ||||| ||| || || || |||||||| ||
Sbjct 11362 ATGTCCGCCACGAAGACGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATC 11421
Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362
| | |||||| || ||||| ||||| ||||| ||||| |||| | ||| || |
Sbjct 11422 GCTTAACGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGG 11481
Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
||||| ||||||||||| || ||||| ||||||||||| || || | |||| || |||
Sbjct 11482 CGGGATACCTTCTTTATCTTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTC 11541
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| | || || ||||| ||||| | ||| || ||||| || ||||||
Sbjct 11542 GACTTCCAAGGTAATAGTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCATT 11593
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | || || | ||||| ||| ||||||||| ||||| ||||||
Sbjct 12506 CCGCCGCGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTC 12565
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || ||||| |||||||| || || || || | || || || | ||||
Sbjct 12566 AATGTGCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGG 12625
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||||||||| || || || ||||| |||||||| || | |||| | ||| |||
Sbjct 12626 ATTCCTTCTTTATCTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACT 12685
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || || || ||||| ||||| || ||||| || |||||
Sbjct 12686 TCCAAAGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | | || | ||||| ||| |||||||||||||||||| |||
Sbjct 12277 TCCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCT 12336
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || |||||||| |||||||| || ||||| || | | ||| || |||
Sbjct 12337 CAAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGG 12396
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
||| |||||||| || || ||||| |||||||||||||| |||| ||| || ||| ||
Sbjct 12397 GATGCCTTCTTTGTCTTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCAC 12456
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
||| | ||||| || || ||||| || ||
Sbjct 12457 TTCCAAGGTGATAGTTTTTCCGGTTAGCGT 12486
Score = 125 bits (138), Expect = 2e-23
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTC-TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||||| || | |||| || | ||| | ||| ||| ||||||||||| || |||
Sbjct 11822 CCACCGCGAAGACGTAAG-ACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCT 11880
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| |||||| |||||||| |||||||| || ||||| || | ||||| || |||
Sbjct 11881 TAACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGG 11940
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| |||||||| || || || || ||||| || || || || | |||| | |||||
Sbjct 11941 AATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTAC 12000
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| | |||||| || || ||||| || || || ||||| || |||||
Sbjct 12001 TTCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 114 bits (126), Expect = 3e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || | ||| ||||| | |||| ||| |||||| || || ||||| ||
Sbjct 11593 TCCACCACGTAATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCACT 11652
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || || || ||||| || ||||| || || ||||||| || || || |||
Sbjct 11653 CAGAGTACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGG 11712
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| |||||||||||||| ||||| ||||| || ||||| || | |||| || ||| ||
Sbjct 11713 TATGCCTTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCAC 11772
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || || || || || || || || ||||| || |||||
Sbjct 11773 CTCCAAGGTTATGGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || || || |||||| | || || || |||||||||||||| || |||||
Sbjct 12086 TCTTTCTGAATGTTGTAGTCGCTCAAAGTACGACCATCTTCTAATTGTTTACCGGCGAAA 12145
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| | | || || |||||| ||||||||||| |||||||| ||||| || |||
Sbjct 12146 ATTAATCTTTGCTGGTCGGGTGGGATACCTTCTTTATCTTGGATTTTTGCTTTTACATTT 12205
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | ||| ||||| | |||||| || || || || || || || |||
Sbjct 12206 TCGATTGTGTCAGATGGTTCGACTTCTAACGTGATAGTTTTTCCAGTGAGCGTTTTAACG 12265
Query 288463 AATATCTGCATT 288474
|| || ||||||
Sbjct 12266 AAAATTTGCATT 12277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178439420111708
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