Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq17446 98.7 2e-15
>seq17446
Length=11869
Score = 98.7 bits (108), Expect = 2e-15
Identities = 159/224 (71%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490
||||| ||||||||||| || | ||| ||| ||| || |||||||| || |||| ||||
Sbjct 4634 AGTTTGGTGAAAATATAACGAGGACTGGCGGCATCTTTGCCACCCTGTAACCTCGTACCG 4575
Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550
||||| || | || || ||||||| |||||||| ||||| |||| || || |
Sbjct 4574 AACTGACCGTTGGGTTGTAATAAGTTGATATTATTGCTACCGACGTAATTTTGCGCCAAA 4515
Query 297551 TTCACGATGGT--CCCTTGCAGAGATGCTTCGCCATGGTGATAGGC-GCTATGCTCTGCA 297607
|| | || || | || | |||| ||| ||||| ||||| || | || || |||
Sbjct 4514 TTTATAATAGTAGACATT--AACGATGTTTCACCATGATGATATGCTGATA-ATTCGGCA 4458
Query 297608 ACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATT 297651
|| ||||| ||||| ||||| |||| || ||||||| ||
Sbjct 4457 ACTGAACCGGCCAACTGGGCAACTTTCAGCTCTTTCGTCAAGTT 4414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1101744093569100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |