Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq19381 82.4 9e-11 >seq19381 Length=19756 Score = 82.4 bits (90), Expect = 9e-11 Identities = 158/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 ||||||| ||| |||||||| | || | || | ||||| | ||||| ||||| | Sbjct 9152 TCATGAATTCGTCGGGGATCCACATTGCGTAAAATAAATCCCTAGCGCGAGACTCTTCTT 9093 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || ||| |||| ||| ||||| || | |||||||| ||||| ||||||| || Sbjct 9092 TACCAGAATTTTTTCGCAGCTCTAAAAATTCAAAAATATCCGCATGCCAAGGTTCCAAGT 9033 Query 114921 ACACCGCGATTG-ACCC---CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCA 114976 | | || | | |||| ||| | | || | |||| || || || |||||| | Sbjct 9032 AAATAGCAAAAGCACCCGGTCTTTTGTTG-CCTCCTTGGTCCACGTATCTGGCTGTGTTA 8974 Query 114977 TTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC 115026 || ||||||||||||| ||||| | ||||| ||| ||| ||||| || Sbjct 8973 TTGTATACGCGAAGCATCGGAATTAGACCATTTGATACGCCGTTTGTTCC 8924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596753364168880