Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 497 4e-136
seq19165 360 8e-95
>seq9614
Length=652
Score = 497 bits (550), Expect = 4e-136
Identities = 289/298 (97%), Gaps = 0/298 (0%)
Strand=Plus/Minus
Query 22925 TACGAAAGAATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGA 22984
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 TACGAAAAAATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGA 243
Query 22985 TGCTACACGAACCTGATGAAAAAACTGGAGACGATAGGATTCGACACCAAAAAAGACCTG 23044
|||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||
Sbjct 242 TGCTACACGAACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTG 183
Query 23045 CTTATCTCGGTGGGCGATTTGGTTGATCGCGGTACAGAGAACGTAGAATGCCTGGAATTA 23104
||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||
Sbjct 182 CTTATCTCGGTGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTA 123
Query 23105 ATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGC 23164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 ATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGC 63
Query 23165 TTATCAGAGCGTGGAAACGTCAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 23222
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 62 TTATCAGAGCGTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 5
Score = 237 bits (262), Expect = 6e-58
Identities = 149/161 (93%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 22759 ATCGCGTCGAACTGATTAACCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 22818
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 22819 ATAACCGCCATCGCTGGACTGTCGAAGAGTGCAGGGCCATCAAGGCGGAGTATCAACAGA 22878
|||||||||||||||||||| |||||||||||| ||| |||||||| ||||| |||||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 22879 AACTTAAAAAACTGCGAAACAGCAGAAGTGAGGTTGCATGA 22919
|||| ||| | |||||||| ||||||||||||| ||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGA 492
>seq19165
Length=1007
Score = 360 bits (398), Expect = 8e-95
Identities = 226/244 (93%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 4960 TTGCTTTTTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 5019
|||| | |||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 252 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 193
Query 5020 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 5079
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 133
Query 5080 TGCCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTTGCGGATAC 5139
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 132 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 73
Query 5140 AGTCTGGTAGTTCAGGCGACGCATTTTTATTGCTGTATTGCGCTGTAATTCTTCAATTTC 5199
|| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 72 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 13
Query 5200 TGAT 5203
||||
Sbjct 12 TGAT 9
Score = 277 bits (306), Expect = 7e-70
Identities = 179/196 (91%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 4573 TTTCCAGTTCTGCTATGCGCTTACTTCCATCCGCGATTACTCCCTCGTAATATTCACGCT 4632
||||||||| || || |||||||| ||||||| ||| || || |||||||| |||||||
Sbjct 507 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 448
Query 4633 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCG 4692
|||||||||||||||||||||||| |||||||||||||||||| ||||| || || ||||
Sbjct 447 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 388
Query 4693 CAATCCCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 4752
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 328
Query 4753 CCAGCAGTTCCAGCAC 4768
||||||||||||||||
Sbjct 327 CCAGCAGTTCCAGCAC 312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198559077625188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |