Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 143 3e-29
seq63578 120 3e-22
seq52934 95.1 1e-14
>seq28572
Length=14732
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||||||||||||| | ||| |||||||| || |||||||||||
Sbjct 1605 CCACCACGAAGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAA 1664
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | | ||| || ||||| ||||| ||| | || || || ||||||||||||||
Sbjct 1665 AGAGTTCTACCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGG 1724
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || || ||||| ||| || ||||| | ||||| |||||| || ||||||
Sbjct 1725 ATTCCTTCTTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGACT 1784
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | |||||| ||||||| || || || || || |||||
Sbjct 1785 TCGAGAGTAATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 123 bits (136), Expect = 2e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | ||||| | |||||||||| || || || ||||| ||||||||||||
Sbjct 3201 CCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAA 3260
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || || || || || ||||||||| |||||| || || ||||| |||||
Sbjct 3261 AGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGA 3320
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTC---TCG 127063
|| || ||||| || |||||| ||||| | ||||| || || |||| ||
Sbjct 3321 ATACCTTCCTTATCTTGAATTTTCGCCTTGACGTTTTCGATCGTATC---ACTCGGTTCA 3377
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||| ||| | ||||| || |||| |||||||| || ||||||||
Sbjct 3378 ACTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCAT 3427
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||||||||| ||||| |||||||| || || || || | || | | ||| ||
Sbjct 2991 ACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTCG 3050
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|| ||||| || ||| | |||| || ||||| || ||||| ||||| || || ||| ||
Sbjct 3051 AGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCC-TG 3109
Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
| ||| ||| |||| | ||| | ||||| || ||||||||||| || | |||||
Sbjct 3110 AATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTT 3169
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||| | |||||||| || ||||||||
Sbjct 3170 GCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||||||||| || || |||||||| || ||||||||| | || || || ||
Sbjct 2535 ACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTCG 2594
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|| ||||| || ||| | || || || || ||||| || || || |||||||| |||
Sbjct 2595 AGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCCTGA 2654
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
||||| ||||| | ||||| |||||| | ||| ||||||| || | |||||
Sbjct 2655 ATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTTA 2714
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | ||||| || |||||||||||
Sbjct 2715 CCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
||||| | || ||||| | || || |||||||||||||| ||||| | || |
Sbjct 1842 AATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGAGAGAGTTCTG 1901
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
|| || || |||||||| ||| | || | || ||||| || ||||| || ||||||
Sbjct 1902 CCGTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGGAATTCCCTCC 1961
Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075
|| || |||||| ||||| | ||||| ||||| || ||||||||||| |||
Sbjct 1962 TTATCTTGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGACTTCGAGGGTG 2021
Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||| || || | ||||| || ||||| |||||
Sbjct 2022 ATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 2059
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
||||| | ||| | ||||| || || || |||||||||||||||||| | || ||
Sbjct 2070 AATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGG 2129
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
||| || || ||||| || || | || || || || ||||| || || || || |||
Sbjct 2130 CCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCC 2189
Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075
|| || |||||| ||||| | ||||| |||||| | ||| ||||||| ||
Sbjct 2190 TTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTG 2249
Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||| || || || ||||| || || || |||||
Sbjct 2250 ATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
>seq63578
Length=26733
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| |||| ||||| || ||||| | |||||||||||| ||||| ||||| |||| |
Sbjct 12050 CCACCACGTAGACGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTC 12109
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| |||| ||||| || ||| | || |||| ||||| ||||| ||
Sbjct 12110 AAAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGG 12169
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || || || |||||| ||| || | | ||||| ||||| | |||||
Sbjct 12170 ATACCTTCTTTATCTTGGATTTT-TGCTTTTACATTTTCGATTGTGTCAGATGGTTCGAC 12228
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| || || || ||||| || ||||| |||||
Sbjct 12229 TTCTAACGTGATAGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 12276
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || || |||||||||| || || || ||||| |||||||||||||
Sbjct 11822 CCACCGCGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTT 11881
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || | ||||| || ||| | || ||||||||||| ||||| ||
Sbjct 11882 AACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGA 11941
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || |||| | ||| | | || || | | |||| || || | ||| ||
Sbjct 11942 ATACCTTCTTTGT-CTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTAC 12000
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| ||||| || |||||||| ||||| |||||
Sbjct 12001 TTCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| ||||| | || | |||||||| | ||| || ||||||||||||||||| |||| |
Sbjct 12506 CCGCCGCGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTC 12565
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||||| || || | || || || ||||| || || ||
Sbjct 12566 AATGTGCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGG 12625
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || || | | ||| | | || |||| | ||||| || || | || ||
Sbjct 12626 ATTCCTTCTTTAT-CTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAAC 12684
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| ||||| ||||||||||| || || |||||
Sbjct 12685 TTCCAAAGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
>seq52934
Length=6696
Score = 95.1 bits (104), Expect = 1e-14
Identities = 137/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983
||||||| |||||||||||| | || | | ||| || | || ||||| ||| |||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGT 127042
|||| || ||||| |||||||| || || || || | | ||| ||| || || | | |
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTAT-CTTGAATTTTAGCTTTTACATTT 4084
Query 127043 TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 127102
|| | || |||| | |||||||||| || | |||||| || || || ||||| ||
Sbjct 4085 TCAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACG 4144
Query 127103 AAAATCTGCAT 127113
|| ||||||||
Sbjct 4145 AAGATCTGCAT 4155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475023004908640
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