Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 116 3e-21
seq28572 102 6e-17
seq52934 82.4 5e-11
>seq63578
Length=26733
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | ||| || |||||||| | || ||||||||| ||||| || ||| |
Sbjct 12506 CCGCCGCGAAGACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTC 12565
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| ||| |||| ||||||||||| ||| |||||||||| || ||||| || | ||
Sbjct 12566 AATGTGCGGCCATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGG 12625
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||| || || || ||| | | | | || || | ||| ||
Sbjct 12626 ATTCCTTCTTTATCTTGAATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACT 12685
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| ||||| || || | ||||||||||||||| |||||
Sbjct 12686 TCCAAAGTAATGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| | |||||||| | ||| ||| ||||| ||||| ||||||
Sbjct 11822 CCACCGCGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTT 11881
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| ||| | || ||||||||||| ||| | |||||||| |||||||| || | ||
Sbjct 11882 AACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGA 11941
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| || || ||||| || | | ||| || | || ||
Sbjct 11942 ATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTCTCGATTGTATCGGATGGCTCTACT 12001
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || |||||||| || | ||||||||||| || |||||
Sbjct 12002 TCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCAT 12048
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | ||||| |||||||| | ||| || || || ||||||||||||
Sbjct 11366 CCGCCACGAAGACGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTT 11425
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| ||| |||| |||||||| || || | ||||| || | |||||| || | ||
Sbjct 11426 AACGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGGG 11485
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||| || ||||| ||| | || | | || || | ||| ||
Sbjct 11486 ATACCTTCTTTATCTTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACT 11545
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| || || || ||||||||||| ||||| || |||||
Sbjct 11546 TCCAAGGTAATAGTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCAT 11592
Score = 95.1 bits (104), Expect = 8e-15
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| | ||| | || ||||| | |||| ||||||||| |||||||||||| |
Sbjct 12278 CCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTC 12337
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || | || ||||||||||| ||| | |||||||| | |||||| || | ||
Sbjct 12338 AAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGG 12397
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||||||| ||||| ||| | | | | || || | ||||||
Sbjct 12398 ATGCCTTCTTTGTCTTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACT 12457
Query 39673 TCCAAAGTAATTGTTTTACCCGTTA 39697
||||| || || ||||| || ||||
Sbjct 12458 TCCAAGGTGATAGTTTTTCCGGTTA 12482
>seq28572
Length=14732
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| || || || | ||| ||||| ||| ||||| ||||| |||||||
Sbjct 2061 CCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAG 2120
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| || |||| || | |||||| ||| ||||||||||||| || ||||| | |||
Sbjct 2121 AGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGA 2180
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||||| || || ||||| || | | ||| | ||| ||| || || |
Sbjct 2181 ATTCCTTCCTTATCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCACTGGGC--TCTA 2238
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || | ||| || ||||||||||||| ||||| |||||||| |||||
Sbjct 2239 CTTCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 100 bits (110), Expect = 2e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| | ||| || |||||||| || || ||||||||| || || |||||||
Sbjct 2517 CCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAA 2576
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || | || || | |||||| ||| | ||||||||||| || ||||| | |||
Sbjct 2577 AGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGA 2636
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669
| || || || || | | |||| | || | || ||| | ||| ||| || ||
Sbjct 2637 ATTCCCTCCTTATC-CTGAATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGC--TCT 2693
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || | ||| || |||||||| ||||| ||||| ||||| ||||||||
Sbjct 2694 ACTTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 98.7 bits (108), Expect = 7e-16
Identities = 163/233 (70%), Gaps = 12/233 (5%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| | ||| || |||||||| ||||| ||||||||| || ||||| || |
Sbjct 2973 CCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCG-- 3030
Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608
|| | |||| ||| || | |||||| ||| | ||||| | ||| ||||| ||||
Sbjct 3031 --AAAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGG 3088
Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTT 39666
|| | ||||||||| || |||||| || | | | | ||||| | |||
Sbjct 3089 AGGGATGCCTTCTTTATCCTGAATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCT- 3147
Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || || | ||| || ||||| || ||||| ||||||||||||||||||||
Sbjct 3148 -CGACTTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
>seq52934
Length=6696
Score = 82.4 bits (90), Expect = 5e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 39530 CTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAA 39589
||||||| ||||| ||||||| | | | |||| |||||||| || ||| | || |
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 39590 TTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG 39649
| ||||| ||||| || | || | |||||||| || ||||| ||| | |
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 4085
Query 39650 CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGA 39709
| | || || | ||| || || | ||| || ||||||||||||| ||||| ||||
Sbjct 4086 CAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGA 4145
Query 39710 AGATCTGCAT 39719
||||||||||
Sbjct 4146 AGATCTGCAT 4155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347029280483138
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |