Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq62562 100 3e-16 >seq62562 Length=14681 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 ||||| || |||||| ||| || || || || | |||||| ||||||||| | |||| Sbjct 9868 TACACCCCTTATCAATGTGAAATTTCCCAAGGTCGTTTGGAAAATTTATTCAACTTCCAA 9927 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | ||| ||||| || || ||| ||||||| |||||||| || ||||||| Sbjct 9928 ACCATGGTCATCGAACTGACCGGTTTAGACGTAGCAAATGCATCTCTGTTGGATGAAGGC 9987 Query 153408 ACTGCAGCAGCAGAAGCAAT 153427 ||||| |||||||||||||| Sbjct 9988 ACTGCCGCAGCAGAAGCAAT 10007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578630792498240