Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 172 1e-37
seq63578 152 1e-31
seq52934 149 1e-30
seq46443 102 2e-16
seq77090 96.9 8e-15
>seq28572
Length=14732
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| ||| || | || || || |||||||| || ||||||||||| | |||||||||
Sbjct 1614 AGTCGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAAAGAGTTCTA 1673
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| |||||||| || ||||| || | ||||| || || ||||| || ||||||
Sbjct 1674 CCATCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGGATTCCTTCT 1733
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| || || ||||||||| || |||||||| | ||| ||||| || |||
Sbjct 1734 TTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGACTTCGAGAGTA 1793
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||| || || ||||| || || ||||| | ||||||
Sbjct 1794 ATCGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCAT 1831
Score = 165 bits (182), Expect = 2e-35
Identities = 159/203 (78%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| || || ||||| ||||||||||||| ||| |||| || |||||||| ||||| ||
Sbjct 3230 AGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCGAGTTGCTTTCC 3289
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| || |||||||| || |||||||| ||||| || ||||||||||| |||
Sbjct 3290 AGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTCGCCTT 3349
Query 195063 GACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
|||||| || || || || ||| ||| ||||| ||||| | || || || |||||
Sbjct 3350 GACGTTTTCGATCGTATC---ACTCGGTTCAACTTCGAGGGTGATGGTTTTACCAGTCAA 3406
Query 195120 AGTTTTTACGAACACTTGCATTT 195142
||||||||||| | |||||||
Sbjct 3407 CGTTTTTACGAAGATCTGCATTT 3429
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| || |||||||||||||| ||||| | |||||||| || |||||||| ||
Sbjct 1857 TGAAGAGTCGATTCTTTTTGAATATTATAATCCGAGAGAGTTCTGCCGTCTTCGAGTTGT 1916
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || ||||| || || ||||| |||||||||||||| || || || ||||| |||||
Sbjct 1917 TTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGGAATTCCCTCCTTATCTTGGATTTTG 1976
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||| || || || ||||| | || ||||| ||||| | || || |||||
Sbjct 1977 GCCTTGACATTTTCGATTGTGTCACTAGGCTCGACTTCGAGGGTGATTGTTTTACCTGTT 2036
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| ||||| ||||| | ||||||
Sbjct 2037 AAGGTTTTGACGAAAATTTGCAT 2059
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | ||| | || | ||| || |||||||| || || || || | ||| ||
Sbjct 2978 TCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGT 3037
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||||||||| || ||||| ||||| || || ||||| ||||| ||||| |||||
Sbjct 3038 TCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCC 3097
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||| || ||||||||| ||||||||| ||||| ||||| | || ||||| ||
Sbjct 3098 TTCTTTATCCTGAATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAG 3157
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || || || ||||||||||| | |||||
Sbjct 3158 AGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 156 bits (172), Expect = 9e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || || |||||||| || || || || | |||||||| ||||||||||| ||
Sbjct 2769 TGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAGAGAGTTCTTCCATCTTCGAGTTGT 2828
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| || |||||||| || || ||||| || ||||| ||||| |||||
Sbjct 2829 TTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCTTGTATTTTG 2888
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| ||||| ||||| | || ||||| || |||| ||| || || |||
Sbjct 2889 GCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAACTTCGAGTGTAATCGTTTTACCAGTC 2948
Query 195118 AAAGTTTTTACGAACACTTGCATT 195141
|| || || ||||| | |||||||
Sbjct 2949 AAGGTCTTGACGAAGATTTGCATT 2972
Score = 136 bits (150), Expect = 9e-27
Identities = 158/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || | ||| || || ||||||||||||||||||| || |||| |||||||||
Sbjct 2079 ACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCTTCG 2138
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| || || || || || || | |||||||| ||||| ||||| ||||| || |||||
Sbjct 2139 AGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCTTGG 2198
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
||||| ||||||||| || |||||||| ||| || ||||| || || | ||
Sbjct 2199 ATTTTAGCCTTGACGTTTTCGATGGTGTC---ACTGGGCTCTACTTCGAGAGTGATGGTT 2255
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||||| ||||| | ||||||
Sbjct 2256 TTACCCGTTAGGGTTTTAACGAAGATTTGCAT 2287
Score = 127 bits (140), Expect = 5e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || |||||||| || || || || | ||||||||| ||||||||||| || |||||
Sbjct 2319 GTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCA 2378
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| |||||||| ||||| || || || ||||| || || || ||||||||||| ||||
Sbjct 2379 GCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTG 2438
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || ||||| | || || || || || | || || || || || ||
Sbjct 2439 ACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTC 2498
Query 195124 TTTACGAACACTTGCATT 195141
|| ||||| | |||||||
Sbjct 2499 TTGACGAAAATTTGCATT 2516
>seq63578
Length=26733
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||||||| ||||| ||||| || ||||| ||||| | |||||||| | |||
Sbjct 11617 GTGAAGAGTGGATTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCCAACTG 11676
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||||| || ||||| | |||||| |||||||| || ||||||||||| || ||||||||
Sbjct 11677 TTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTGGTATGCCTTCTTTATCCTGAATTTT 11736
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||| || |||||||| || || |||||| || | ||| | || ||||| ||
Sbjct 11737 AGCTTTGACATTTTCAATGGTATCGGACGGTTCCACCTCCAAGGTTATGGTTTTTCCAGT 11796
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||||| ||||| | ||||||
Sbjct 11797 GAGCGTTTTAACGAAAATTTGCAT 11820
Score = 147 bits (162), Expect = 5e-30
Identities = 161/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|||||| | ||||| |||||||| || |||||||| |||||| | || | |||||
Sbjct 11380 CAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTTAACGTGCGGCCATC 11439
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| | ||||| || ||||| || | || || ||||| || || || |||||||| ||
Sbjct 11440 TTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGGGATACCTTCTTTATC 11499
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||||||||| || |||||||| ||||| || || ||| ||||| | ||||| ||
Sbjct 11500 TTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACTTCCAAGGTAATAGT 11559
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| || || |||||||| ||||| | |||||||
Sbjct 11560 CTTGCCGGTTAAAGTTTTCACGAAAATTTGCATT 11593
Score = 127 bits (140), Expect = 5e-24
Identities = 143/189 (76%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCG-GCAAGAGTTCTCCCATC 194987
||||| | ||||||||||| |||||||| ||||| |||||| |||| || | || ||
Sbjct 12293 AAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAAG-GTACGACCGTC 12351
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| | || ||||| ||||| || | || || ||||| || || ||||||||||||||
Sbjct 12352 TTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCCTTCTTTGTC 12411
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||||||||| || ||||| ||||| || || || ||||||||| | ||| | ||
Sbjct 12412 TTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAAGGTGATAGT 12471
Query 195108 CTTTCCTGT 195116
||||| ||
Sbjct 12472 TTTTCCGGT 12480
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || || ||||||||||||||||| ||| | || | |||||||| | ||
Sbjct 12530 TGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTGCGGCCATCTTCCAATTGT 12589
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || || || | ||||| ||||| || || || |||||||| |||||||| ||
Sbjct 12590 TTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCTTCTTTATCTTGAATCTTG 12649
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||||| || || || || || ||| ||||| | |||| || ||||| ||
Sbjct 12650 GCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTA 12709
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| |||||||||||| | ||||||
Sbjct 12710 AGAGTTTTTACGAAGATTTGCAT 12732
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || ||||| || ||||| |||||||||||| | || | || ||||| | ||
Sbjct 11846 TGTAGGGTGGATTCCTTTTGGATATTGTAATCGCTTAACGTGCGGCCGTCTTCCAATTGT 11905
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| ||||| || | ||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 11906 TTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGGAATACCTTCTTTGTCTTGAATCTTG 11965
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|| || ||||| || || || || || ||||| | || | || || || ||
Sbjct 11966 GCTTTAACATTCTCGATTGTATCGGATGGCTCTACTTCCAACGTGATAGTTTTACCGGTG 12025
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| ||||||||||| | ||||||
Sbjct 12026 AGCGTTTTTACGAAAATTTGCAT 12048
>seq52934
Length=6696
Score = 149 bits (164), Expect = 1e-30
Identities = 147/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010
||||||| ||||||||||||| |||||||| |||||||| | ||||| || |||||||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070
| | ||||| ||||| ||||| || |||||||| ||||||||||| || || || |
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 4085
Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130
|||| || |||||| ||| ||||| || || | ||| || || || | ||||| ||||
Sbjct 4086 CAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGA 4145
Query 195131 ACACTTGCAT 195140
| | |||||
Sbjct 4146 AGATCTGCAT 4155
>seq46443
Length=17015
Score = 102 bits (112), Expect = 2e-16
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || ||||| || |||||||| || || ||||||| ||| ||
Sbjct 12700 TCTCAATCTCAATACTAAATGCAGAGTAGATTCTTTTTGGATGTTATAATCGGAAAGGGT 12759
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||||| || ||||| || || || | ||||||||||| |||||||||||
Sbjct 12760 ACGTCCATCTTCGAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATGCC 12819
Query 195039 T 195039
|
Sbjct 12820 T 12820
>seq77090
Length=20911
Score = 96.9 bits (106), Expect = 8e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || |||||||| || |||||||| | |||||||| |||||||| || ||||||||
Sbjct 10602 GTCGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCGTCCATCTTCAAGTTGCTTACCA 10543
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
||||| || | |||||||| || ||||||||||||
Sbjct 10542 GCGAAAATCAAACGTTGTTGATCAGGAGGAATGCCT 10507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108338894280062
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