Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq7792 120 4e-22
seq13914 111 2e-19
>seq7792
Length=27931
Score = 120 bits (132), Expect = 4e-22
Identities = 162/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
|||| || || ||| ||||| ||| || || ||||| ||||||| |||| ||||
Sbjct 19175 CTTCGTCCCTTGATATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTT 19234
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
||| |||||||||||| |||||| ||| |||||||| || ||||| || || ||||| |
Sbjct 19235 TAAGCCAAAATATTGCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACG 19294
Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTG 37377
||| | | | || ||||| | | | | ||||| |||||||| | ||| ||||
Sbjct 19295 CTATGATCCTTTCTCCAAAAGTAGCATTTTTATCAGCTATCCATTTCAACGCCCAGTCTG 19354
Query 37378 CCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAA 37423
| || |||||||| ||||||||||| || || || || ||
Sbjct 19355 CTTTCTTCTTAACACAAGGCATTGTTTCAATAGCATTGAACAGGAA 19400
Score = 86.0 bits (94), Expect = 7e-12
Identities = 77/94 (82%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCC-TT 36930
||||||||| |||| | |||||||||||||| ||||||| ||||| || || || ||
Sbjct 18704 CATAACTCCACTTTTCTTATATTCTCCAACTCTCTTTTCGAAGAAATTCGTTTTACCATT 18763
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| || |||||||||||||||||||| || || ||
Sbjct 18764 CAAG-GATATATTTTCCATAAAATCGAAAGGGTT 18796
>seq13914
Length=11729
Score = 111 bits (122), Expect = 2e-19
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
|||| ||||| ||| |||||||| || || | ||| ||||||| || |||||||
Sbjct 7886 CTTCGTCTCTTGATATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTT 7945
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
||| ||||||||| || |||||| ||||||||||||||||||||| || || ||||| |
Sbjct 7946 TAAGCCAAAATATCGCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCAGCAAAAG 8005
Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTG 37377
||| | | | || ||||| | | | ||| ||||| || | ||| || |
Sbjct 8006 CTATGATTCTTTCTCCAAAAGTCGCGTTTTTGTCATTTATCCACTTCAACGCCCAGTCAG 8065
Query 37378 CCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAA 37423
| ||| |||||||| || |||||||| || || || || ||
Sbjct 8066 CTTTTCTCTTAACACACGGCATGGTTTCAATGGCATTGAATAGGAA 8111
Score = 93.3 bits (102), Expect = 5e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498
|||| | || ||||| ||||| | || || |||||||| || || | ||| ||||| |
Sbjct 8198 ATCTTTAATGTAAGTGTCAATCAACAAGCTGTACATTTCTGAATGTACATTCTCAATTGT 8257
Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558
|| ||||| || |||||| | || ||||||| | ||| || || | ||||| | ||
Sbjct 8258 GATTTGAAATCCGTAAAAAAATCTGGCTTCAGGAATTTGTACTTCTTGGAAAAAACGCTC 8317
Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC 37609
|||| ||||||||||| || |||||| || || || || || | |||
Sbjct 8318 GACTAAATTTTCATTAACGATACCATCAGAGGCAGCGAAAAATGCTAAAAC 8368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 591721625271440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |