Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_018275.1 Length=39783 Score E Sequences producing significant alignments: (Bits) Value seq9614 196 1e-45 >seq9614 Length=652 Score = 196 bits (216), Expect = 1e-45 Identities = 140/161 (87%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 35308 ATCGCGTCGAGCTTATTAACCGTATCGGTCAGGCCGCGGTAGACGAAATCGAATCAAACC 35367 |||||||||| || |||| ||| ||||| |||| || |||||||||||||||||||||| Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593 Query 35368 ATAACCGCCATCGCTGGACTATCGAAGAATGCAAAGCGATTAAGGCGGAGTATCAGCAGA 35427 |||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| || |||| Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533 Query 35428 AGCTTAAATACCTGCGTGACAGCAGAAGTGAGGCAGCATGA 35468 | || ||| ||||||| | |||||||||||||| |||||| Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGA 492 Score = 89.7 bits (98), Expect = 1e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 35678 GAGGCCGCATGACACACACTATCAAAACCATTCCAGACATGCTCATAGAGACATATGGAA 35737 ||||||||||||| | | | ||||||||||||||||||||| | || ||||| |||| Sbjct 503 GAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGAAACATACGGAA 444 Query 35738 ACCAGACAGAAGTAGCACG 35756 | ||||||||||||||||| Sbjct 443 ATCAGACAGAAGTAGCACG 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127062592220340