Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq9614 232 2e-56 >seq9614 Length=652 Score = 232 bits (256), Expect = 2e-56 Identities = 148/161 (92%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 44359 ATCGCGTCGAACTGATTAACCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 44418 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593 Query 44419 ATAACCGCCATCGCTGGACTATCGAAGAATGCAAAGCGATTAAGGCGGAGTATCAGCAGA 44478 |||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| || |||| Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533 Query 44479 AACTTAAAGACCTGTGTGAAAGCAGAAGTGAGGCAGCATGA 44519 |||| ||||||||| | | |||||||||||||| |||||| Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGA 492 Score = 80.6 bits (88), Expect = 8e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 44729 GAGGCCGCATGACACACACTATCAAAACCATTCCAGACATGCTCATAGAGACATATGGAA 44788 ||||||||||||| | | | ||||||||||||||||||||| | || ||||| |||| Sbjct 503 GAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGAAACATACGGAA 444 Query 44789 ACCAGACAGAAGTCGCTCG 44807 | ||||||||||| || || Sbjct 443 ATCAGACAGAAGTAGCACG 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156899683003896