Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7792 105 1e-17 >seq7792 Length=27931 Score = 105 bits (116), Expect = 1e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || ||| ||||| || ||||| || ||| || || |||||| Sbjct 19213 CCAGGCATTAGGCCTCGCTTTTTAAGCCAAAATATTGCAGCAAAACTTCCTGAAAAGAAG 19272 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||| || || || || ||||| ||| ||| ||||| |||| ||| || || || | Sbjct 19273 ATGCCTTCGACGGCAGCAAACGCTATGATCCTTTCTCCAAAAGTAGCATTTTTATCAGCT 19332 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 ||||| | |||||||||||| |||||||| | || ||||| || || || || Sbjct 19333 ATCCATTTCAACGCCCAGTCTGCTTTCTTCTTAACACAAGGCATTGTTTCAATAGC 19388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930596772554240