Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_019704.1
Length=44375
Score E
Sequences producing significant alignments: (Bits) Value
seq69273 268 3e-67
>seq69273
Length=3889
Score = 268 bits (296), Expect = 3e-67
Identities = 237/296 (80%), Gaps = 0/296 (0%)
Strand=Plus/Minus
Query 2051 GTTTACCTCACAGAGGTAGGAACAGACACCGCAAAAGAGCAGATTTATAACCGTTTCACG 2110
|||||||| || || | || || || ||||| |||||||||||||||||||| |||||
Sbjct 779 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 720
Query 2111 CTGGTGGCGCAAAGAGACGAGCCGCTGGCGGGAGCGGTTCATTTCCCGAATAACCCAGAA 2170
||| | || || | || || ||||| | || || ||||| |||||||||||||| ||
Sbjct 719 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 660
Query 2171 ATCTACGATCTAACAGAGGCCCAACAACTAACAGCTGAAGAGCAGGTGGAAAAATGGGTA 2230
|| | ||||| || || || || || || || |||||||||||||| |||||||||||
Sbjct 659 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 600
Query 2231 GACGGAAAGAAAAAGATCGTCTGGGACAGCAAAAAACGACGAAATGAGGCGCTCGATTGC 2290
|| || | |||||| || | |||||||||||||| ||||| |||||||| ||||| |||
Sbjct 599 GATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 540
Query 2291 TTTGTTTATGCACTGGCGGCGCTGCGTATAAGCATATCCCGCTGGCAGCTAAATCT 2346
|| |||||||| |||||||||||||| || || || |||||||||||||| ||||
Sbjct 539 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCT 484
Score = 136 bits (150), Expect = 1e-27
Identities = 125/158 (79%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 12429 TTTGCAGGTGGCGGTTATACCGGTTCAGGCGGGAAATATGAACCTGCAGGTGTCGTTCAC 12488
|||||| || || | ||| || | ||||| |||||||| || || || | ||||||
Sbjct 3815 TTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCAC 3756
Query 12489 CGTGGTGAATTTGTTTTCACCAAAGAGGCTACCAGCCGGATCGGCGTCGGCAATCTTTAC 12548
|||||||| ||||| ||||| || ||||| ||||||||||| ||||| || |||||||||
Sbjct 3755 CGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTAC 3696
Query 12549 CGGATGATGAAAGGGTATGCCACGGGTGGGTATGTCGG 12586
||| ||||| || |||||||| || || ||||||||
Sbjct 3695 CGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGG 3658
Score = 129 bits (142), Expect = 2e-25
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 2665 TGGGACCTGACGGGAAAACATCCCTTCGGGAATACGCAGGATATCATGGCGGTGGAGGCG 2724
|||| || ||||| | ||||| || || ||||| || || ||||| |||||||| |||
Sbjct 3597 TGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGGCAGCG 3538
Query 2725 GGTTTGGTGGGCAGCTGCGAGGCTGGAATCCGCCGAGTGAAAGTGCAGATGCCGCACTCC 2784
| ||||| |||||| |||| ||||| || ||||||||||||| ||||| || ||
Sbjct 3537 GATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGCCCTGT 3478
Query 2785 TACCCAACTATTCTCGCGGAAATGCCCGCGCTGACGATCTG 2825
| ||||||| | | || || ||||||||||| |||||||||
Sbjct 3477 TGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 3437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141742965184884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |