Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_019711.1
Length=47288
Score E
Sequences producing significant alignments: (Bits) Value
seq69273 560 3e-155
seq67353 343 4e-90
>seq69273
Length=3889
Score = 560 bits (620), Expect = 3e-155
Identities = 310/310 (100%), Gaps = 0/310 (0%)
Strand=Plus/Minus
Query 2051 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 720
Query 2111 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 2170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 660
Query 2171 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 2230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 600
Query 2231 GATGGCAGGaaaaaaaTACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 2290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 GATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 540
Query 2291 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCAGT 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCAGT 480
Query 2351 GCGCTGCTGG 2360
||||||||||
Sbjct 479 GCGCTGCTGG 470
Score = 482 bits (534), Expect = 7e-132
Identities = 269/270 (99%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 12474 TTGGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCGCTG 12533
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3889 TTAGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCGCTG 3830
Query 12534 CGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAG 12593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3829 CGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAG 3770
Query 12594 CGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCG 12653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3769 CGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCG 3710
Query 12654 TGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACACCGG 12713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3709 TGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACACCGG 3650
Query 12714 GCAGCATGGCAGACAGCCGGTCGCAGGCGT 12743
||||||||||||||||||||||||||||||
Sbjct 3649 GCAGCATGGCAGACAGCCGGTCGCAGGCGT 3620
Score = 300 bits (332), Expect = 5e-77
Identities = 166/166 (100%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 2669 CCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGG 2728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3602 CCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGG 3543
Query 2729 CAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGC 2788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3542 CAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGC 3483
Query 2789 CCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 2834
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3482 CCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 3437
>seq67353
Length=817
Score = 343 bits (380), Expect = 4e-90
Identities = 190/190 (100%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 12244 AGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGT 12303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503 AGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGT 444
Query 12304 AAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGAC 12363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 AAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGAC 384
Query 12364 CGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAAT 12423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 CGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAAT 324
Query 12424 TCTGCTTAAG 12433
||||||||||
Sbjct 323 TCTGCTTAAG 314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151055666937000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |