Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_019720.1
Length=44120
Score E
Sequences producing significant alignments: (Bits) Value
seq9614 1088 0.0
seq69273 120 9e-23
>seq9614
Length=652
Score = 1088 bits (1206), Expect = 0.0
Identities = 630/648 (97%), Gaps = 0/648 (0%)
Strand=Plus/Minus
Query 39240 ATCGCGTCGAACTGATTAACCGCATAGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 39299
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 39300 ATAGCCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 39359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 39360 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 39419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473
Query 39420 TCCAGACATGCTCGTTGAAGCATACGGAAACCAGACAGAAGTAGCACGCAGGCTGAAATG 39479
||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||
Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413
Query 39480 TAGTCGCGGCACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 39539
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353
Query 39540 CAACGACGTTCTTATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAGAA 39599
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 293
Query 39600 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 39659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 233
Query 39660 ACCTGATGAAAAAACTGGAGACGATAGGATTCGACACCAAAAAAGACCTGCTTATCTCGG 39719
|||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||
Sbjct 232 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 173
Query 39720 TTGGCGATTTGGTTGATCGCGGTACAGAGAACGTCGAATGCCTGGAATTAATCACATTCC 39779
| ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||
Sbjct 172 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 113
Query 39780 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 39839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 53
Query 39840 GTGGAAACGTCAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 39887
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 52 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 5
>seq69273
Length=3889
Score = 120 bits (132), Expect = 9e-23
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 12346 GGCGGTTTTACCGGGCACGGCGGCAAGTACGAGCCAGCCGGTATCGTTCACCGCGGGGAA 12405
|| || ||||| || ||||||||| || |||||||| || || |||||||| || ||
Sbjct 3806 GGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGTGGTGAG 3747
Query 12406 TTCGTCTTCACCAAAGAATCAACCAGCCGCATCGGCGTGGCTAATCTCTATCGCCTGATG 12465
|| |||||||| || || |||||||||| || ||||||| ||||| || || ||||||
Sbjct 3746 TTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGGCTGATG 3687
Query 12466 CGCGGGTATGCCTCGGGTGGTCTGGTCGG 12494
||||| |||||| | || ||| |||||
Sbjct 3686 CGCGGCTATGCCACCGGCGGTTATGTCGG 3658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140927744125224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |