Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_019723.1
Length=47090
Score E
Sequences producing significant alignments: (Bits) Value
seq19165 1802 0.0
seq9614 1164 0.0
seq69273 560 3e-155
seq67353 343 4e-90
>seq19165
Length=1007
Score = 1802 bits (1998), Expect = 0.0
Identities = 999/999 (100%), Gaps = 0/999 (0%)
Strand=Plus/Minus
Query 29404 CGGATCTGCACAACATTGATAACGCCCAATCTTTTTGCTCAGACTCTAACTCATTGATAC 29463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007 CGGATCTGCACAACATTGATAACGCCCAATCTTTTTGCTCAGACTCTAACTCATTGATAC 948
Query 29464 TCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTATCAGCAATGTTTAT 29523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTATCAGCAATGTTTAT 888
Query 29524 GTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACT 29583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 GTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACT 828
Query 29584 ACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCT 29643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 ACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCT 768
Query 29644 TTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAG 29703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 767 TTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAG 708
Query 29704 ATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGAT 29763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 707 ATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGAT 648
Query 29764 GTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACC 29823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 GTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACC 588
Query 29824 AGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCC 29883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 AGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCC 528
Query 29884 GTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAAC 29943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 GTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAAC 468
Query 29944 ACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACG 30003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 467 ACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACG 408
Query 30004 CAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTG 30063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 CAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTG 348
Query 30064 CTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATG 30123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 347 CTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATG 288
Query 30124 GAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAG 30183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 GAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAG 228
Query 30184 TGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCC 30243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 TGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCC 168
Query 30244 TCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATC 30303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 TCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATC 108
Query 30304 GGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATT 30363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 GGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATT 48
Query 30364 TTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGAT 30402
|||||||||||||||||||||||||||||||||||||||
Sbjct 47 TTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGAT 9
>seq9614
Length=652
Score = 1164 bits (1290), Expect = 0.0
Identities = 647/648 (99%), Gaps = 0/648 (0%)
Strand=Plus/Minus
Query 41282 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 41341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593
Query 41342 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 41401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533
Query 41402 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 41461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473
Query 41462 TCCAGACATGCTCGTTGAAGCATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 41521
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413
Query 41522 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 41581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353
Query 41582 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 41641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 293
Query 41642 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 41701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 233
Query 41702 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 41761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 173
Query 41762 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 41821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 113
Query 41822 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 41881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 53
Query 41882 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 41929
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 52 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 5
>seq69273
Length=3889
Score = 560 bits (620), Expect = 3e-155
Identities = 310/310 (100%), Gaps = 0/310 (0%)
Strand=Plus/Minus
Query 2051 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 720
Query 2111 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 2170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 660
Query 2171 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 2230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 600
Query 2231 GATGGCAGGaaaaaaaTACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 2290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 GATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 540
Query 2291 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCAGT 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCAGT 480
Query 2351 GCGCTGCTGG 2360
||||||||||
Sbjct 479 GCGCTGCTGG 470
Score = 482 bits (534), Expect = 7e-132
Identities = 269/270 (99%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 12474 TTGGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCGCTG 12533
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3889 TTAGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCGCTG 3830
Query 12534 CGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAG 12593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3829 CGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAG 3770
Query 12594 CGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCG 12653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3769 CGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCG 3710
Query 12654 TGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACACCGG 12713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3709 TGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACACCGG 3650
Query 12714 GCAGCATGGCAGACAGCCGGTCGCAGGCGT 12743
||||||||||||||||||||||||||||||
Sbjct 3649 GCAGCATGGCAGACAGCCGGTCGCAGGCGT 3620
Score = 300 bits (332), Expect = 5e-77
Identities = 166/166 (100%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 2669 CCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGG 2728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3602 CCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGG 3543
Query 2729 CAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGC 2788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3542 CAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGC 3483
Query 2789 CCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 2834
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3482 CCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 3437
>seq67353
Length=817
Score = 343 bits (380), Expect = 4e-90
Identities = 190/190 (100%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 12244 AGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGT 12303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503 AGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGT 444
Query 12304 AAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGAC 12363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 AAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGAC 384
Query 12364 CGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAAT 12423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 CGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAAT 324
Query 12424 TCTGCTTAAG 12433
||||||||||
Sbjct 323 TCTGCTTAAG 314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150422671761264
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