Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq19165 1802 0.0 seq9614 1164 0.0 seq69273 560 3e-155 seq67353 343 4e-90 >seq19165 Length=1007 Score = 1802 bits (1998), Expect = 0.0 Identities = 999/999 (100%), Gaps = 0/999 (0%) Strand=Plus/Minus Query 29404 CGGATCTGCACAACATTGATAACGCCCAATCTTTTTGCTCAGACTCTAACTCATTGATAC 29463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1007 CGGATCTGCACAACATTGATAACGCCCAATCTTTTTGCTCAGACTCTAACTCATTGATAC 948 Query 29464 TCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTATCAGCAATGTTTAT 29523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 947 TCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTATCAGCAATGTTTAT 888 Query 29524 GTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACT 29583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 887 GTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACT 828 Query 29584 ACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCT 29643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 827 ACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCT 768 Query 29644 TTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAG 29703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 767 TTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAG 708 Query 29704 ATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGAT 29763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 707 ATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGAT 648 Query 29764 GTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACC 29823 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 GTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACC 588 Query 29824 AGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCC 29883 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 AGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCC 528 Query 29884 GTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAAC 29943 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 GTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAAC 468 Query 29944 ACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACG 30003 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 467 ACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACG 408 Query 30004 CAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTG 30063 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 CAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTG 348 Query 30064 CTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATG 30123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347 CTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATG 288 Query 30124 GAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAG 30183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 GAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAG 228 Query 30184 TGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCC 30243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 227 TGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCC 168 Query 30244 TCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATC 30303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 167 TCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATC 108 Query 30304 GGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATT 30363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107 GGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATT 48 Query 30364 TTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGAT 30402 ||||||||||||||||||||||||||||||||||||||| Sbjct 47 TTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGAT 9 >seq9614 Length=652 Score = 1164 bits (1290), Expect = 0.0 Identities = 647/648 (99%), Gaps = 0/648 (0%) Strand=Plus/Minus Query 41282 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 41341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 652 ATCGCGTCGAACTGATTAGCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACC 593 Query 41342 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 41401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 592 ATAACCGCCATCGCTGGACTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGA 533 Query 41402 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 41461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 AACTCAAAGACCTGCGAAATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCAT 473 Query 41462 TCCAGACATGCTCGTTGAAGCATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 41521 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 472 TCCAGACATGCTCGTTGAAACATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATG 413 Query 41522 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 41581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 412 TAGTCGCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGT 353 Query 41582 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 41641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 CAACGACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAA 293 Query 41642 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 41701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGA 233 Query 41702 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 41761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 ACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGG 173 Query 41762 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 41821 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 TGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCC 113 Query 41822 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 41881 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 CCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGC 53 Query 41882 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 41929 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 GTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 5 >seq69273 Length=3889 Score = 560 bits (620), Expect = 3e-155 Identities = 310/310 (100%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 2051 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 2110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 779 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 720 Query 2111 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 2170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 660 Query 2171 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 2230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 659 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 600 Query 2231 GATGGCAGGaaaaaaaTACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 2290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 GATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 540 Query 2291 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCAGT 2350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCAGT 480 Query 2351 GCGCTGCTGG 2360 |||||||||| Sbjct 479 GCGCTGCTGG 470 Score = 482 bits (534), Expect = 7e-132 Identities = 269/270 (99%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 12474 TTGGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCGCTG 12533 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3889 TTAGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCGCTG 3830 Query 12534 CGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAG 12593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3829 CGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAG 3770 Query 12594 CGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCG 12653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3769 CGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCG 3710 Query 12654 TGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACACCGG 12713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3709 TGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACACCGG 3650 Query 12714 GCAGCATGGCAGACAGCCGGTCGCAGGCGT 12743 |||||||||||||||||||||||||||||| Sbjct 3649 GCAGCATGGCAGACAGCCGGTCGCAGGCGT 3620 Score = 300 bits (332), Expect = 5e-77 Identities = 166/166 (100%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 2669 CCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGG 2728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3602 CCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGG 3543 Query 2729 CAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGC 2788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3542 CAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGC 3483 Query 2789 CCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 2834 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3482 CCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGACGATCTG 3437 >seq67353 Length=817 Score = 343 bits (380), Expect = 4e-90 Identities = 190/190 (100%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 12244 AGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGT 12303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 AGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGT 444 Query 12304 AAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGAC 12363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 443 AAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGAC 384 Query 12364 CGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAAT 12423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 CGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAAT 324 Query 12424 TCTGCTTAAG 12433 |||||||||| Sbjct 323 TCTGCTTAAG 314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150422671761264