Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq19381 118 5e-22
seq59517 100 1e-16
>seq19381
Length=19756
Score = 118 bits (130), Expect = 5e-22
Identities = 165/230 (72%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 25928 TTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCT 25987
||||| || ||| || || ||||||||||| ||||||||||| || || | |||
Sbjct 9155 TTCTC-ATGAATTCGTCGGGGATCCACATTGCGTAAAATAAATCCCTAGCGCGAGACTCT 9097
Query 25988 TCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCT 26047
||||| || ||| ||| || ||||| || ||||||||||| | ||||| |||||
Sbjct 9096 TCTTTACCAGAATTTTTTCGCAGCTCTAAAAATTCAAAAATATCCGCATGCCAAGGTTCC 9037
Query 26048 AAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTT 26107
|| || ||||||||| ||| |||||| || ||||| || |||||||| || ||
Sbjct 9036 AAGTAAATAGCAAAAGCACCCGGTCTTTTGTTGCCTCCTTGGTCCACGTATCTGGCTGTG 8977
Query 26108 TCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGT 26157
| |||| | || | ||| |||| || ||| |||| | ||||||||
Sbjct 8976 TTATTGTATACGCGAAGCATCGGAATTAGACCATTTGATACGCCGTTTGT 8927
Score = 86.0 bits (94), Expect = 3e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 25030 AACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGAT 25089
|||||||| || | | |||||||| | ||||| |||| ||||||||||||||| ||
Sbjct 10293 AACTCTTCGTAAATACATATTTGAAGTATAAGGTTCGAAACTTTCATTATTTCCTAAAAT 10234
Query 25090 TTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTT 25149
|| | |||||| ||||||||||| |||| || || ||||||| | ||| |||||
Sbjct 10233 CTGTGCAGTAGAAGCTGTTGGCATCGGAGCTAATAGGAGTGAATTTCGGACACCGTATTT 10174
>seq59517
Length=19559
Score = 100 bits (110), Expect = 1e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
||||||||||||||| |||| ||| | | | ||||||||| | ||||| ||| ||||
Sbjct 14724 AAATTCTCCAGACAAGACTCGTCTAGTATACATGTTTGAAGTATAAGGTTCGAAAGATTC 14665
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
|||||||||||| ||||||| ||| || || || ||||| || | | ||| |||||
Sbjct 14664 ATTATTTCCTAAAATTTGAGCAGTGGAAGCGGTAGGCATAGGAGCAAGAAGTAGAGAATT 14605
Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||| | || |||| ||| | || ||||||
Sbjct 14604 TCTAACGCCGTATTGTTTAATTTTTTCTTTTAA 14572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252792095604950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |