Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_021190.1
Length=46150
Score E
Sequences producing significant alignments: (Bits) Value
seq69273 266 1e-66
seq9614 165 2e-36
>seq69273
Length=3889
Score = 266 bits (294), Expect = 1e-66
Identities = 233/290 (80%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 2240 GTTTACCTCACAGAGGTAGGAACAGACACCGCAAAAGAGCAGATTTATAACCGTTTCACG 2299
|||||||| || || | || || || ||||| |||||||||||||||||||| |||||
Sbjct 779 GTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCACA 720
Query 2300 CTGGTGGCGCAAAGAGACGAGCCGCTGGCGGGAGCGGTTCATTTCCCGAATAACCCAGAA 2359
||| | || || | || || ||||| | || || ||||| |||||||||||||| ||
Sbjct 719 CTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGGAT 660
Query 2360 ATCTACGATCTAACAGAGGCCCAACAACTAACAGCTGAAGAGCAGGTGGAAAAATGGGTA 2419
|| | ||||| || || || || || || || |||||||||||||| |||||||||||
Sbjct 659 ATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGGTG 600
Query 2420 GACGGAAAGAAAAAGATCGTCTGGGACAGCAAAAAACGACGAAATGAGGCGCTCGATTGC 2479
|| || | |||||| || | |||||||||||||| ||||| |||||||| ||||| |||
Sbjct 599 GATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACTGC 540
Query 2480 TTTGTTTATGCACTGGCGGCGCTGCGTATAAGCATATCCCGCTGGCAGCT 2529
|| |||||||| |||||||||||||| || || || ||||||||||||||
Sbjct 539 TTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCT 490
Score = 120 bits (132), Expect = 9e-23
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 13280 ggCGGTTTTACCGGGCACGGCGGCAAGTACGAGCCAGCCGGTATCGTTCACCGCGGGGAA 13339
|| || ||||| || ||||||||| || |||||||| || || |||||||| || ||
Sbjct 3806 GGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGTGGTGAG 3747
Query 13340 TTCGTCTTCACCAAAGAATCAACCAGCCGCATCGGCGTGGCTAATCTCTATCGCCTGATG 13399
|| |||||||| || || |||||||||| || ||||||| ||||| || || ||||||
Sbjct 3746 TTTGTCTTCACGAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGGCTGATG 3687
Query 13400 CGCGGGTATGCCTCGGGTGGTCTGGTCGG 13428
||||| |||||| | || ||| |||||
Sbjct 3686 CGCGGCTATGCCACCGGCGGTTATGTCGG 3658
>seq9614
Length=652
Score = 165 bits (182), Expect = 2e-36
Identities = 198/269 (74%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 39555 CGCAATATTTTCGTCGTCGGCGATCTGCATGGGTGCTACACGCTGCTGATGAATGAACTC 39614
|| ||||||| || || ||||||||||| || ||||||||| |||||||| ||||
Sbjct 275 CGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTGATGAACAAACTG 216
Query 39615 GAAAAGGTTTCGTTCGACCCTGCGTGTGATTTGCTGATTTCGGTTGGAGACCTTGTTGAC 39674
|| | | || |||||| || |||| || ||||| || || | |||||
Sbjct 215 GATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGCGATTTGGTTGAT 156
Query 39675 CGCGGCGCGGAAAACGTCGAGTGCCTGGAGCTGATTACTATGCCTTGGTTCCGGGCTGTG 39734
|| || || || ||||| || |||||||| | || || | || |||||| | |||||
Sbjct 155 CGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGGTTCAGAGCTGTA 96
Query 39735 CGAGGTAACCATGAGCAGATGATGATTGATGGGCTATCGGAGTATGGAAACGTTAACCAC 39794
|| || ||||||||||| |||||||||||||| |||| ||| |||||||||||| |||
Sbjct 95 CGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGAAACGTTAATCAC 36
Query 39795 TGGCTGGAAAACGGCGGCGTGTGGTTCTT 39823
|||||| || ||||| | ||||||||
Sbjct 35 TGGCTGCTTAATGGCGGTGGCTGGTTCTT 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147417543149184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |