Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 134 2e-26
seq52934 125 1e-23
seq28572 125 1e-23
seq7792 118 2e-21
seq13914 113 7e-20
seq14379 98.7 1e-15
seq77090 95.1 2e-14
>seq63578
Length=26733
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || ||||||| | ||||||||||| || || || || || ||| ||
Sbjct 11820 ATGCAAATTTTCGTTAAAACGCTCACTGGAAAAACCATAACCTTGGAGGTGGAACCGTCC 11761
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||| || ||| |||||| || ||||||||||||||||| ||||| ||
Sbjct 11760 GATACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGCATACCACCAGACCAG 11701
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| ||||||| | ||||||||| ||| | |||||| | | ||| | ||||||||
Sbjct 11700 CAACGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGTACTCTGAGTGATTATAAC 11641
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| ||||| | || ||||| || || | |||||| | || ||
Sbjct 11640 ATTCAGAAAGAATCCACTCTTCACTTGGTACTCAGATTACGTGGTGG 11594
Score = 132 bits (146), Expect = 7e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| || || || || |||||||| || ||||||||| ||
Sbjct 11593 AATGCAAATTTTCGTGAAAACTTTAACCGGCAAGACTATTACCTTGGAAGTCGAACCGTC 11534
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| || ||||||||| |||||| |||||||||||||| || || || || ||
Sbjct 11533 CGATACCATCGAGAACGTGAAAGCTAAAATTCAAGATAAAGAAGGTATCCCGCCTGACCA 11474
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| |||||||||| || || ||||| | |||||| | | || ||| ||||||||
Sbjct 11473 GCAGAGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACGTTAAGCGATTATAA 11414
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
||| || ||| | || |||||||| || ||
Sbjct 11413 TATTCAGAAGGAGTCCACCCTTCATTTGGTTTT 11381
Score = 132 bits (146), Expect = 7e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || ||||||| | |||||||||||||| || |||||||||||| ||
Sbjct 12277 AATGCAAATTTTCGTTAAAACGCTCACTGGAAAAACTATCACGTTAGAAGTCGAACCATC 12218
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || ||| || ||| ||||| |||||||||||||| || || || || ||
Sbjct 12217 TGACACAATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCCGACCA 12158
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||| |||| |||||||| || | |||||| | ||||| || || ||
Sbjct 12157 GCAAAGATTAATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTTTGAGCGACTACAA 12098
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| |||||| | ||||| |||||||| ||
Sbjct 12097 CATTCAGAAAGAGTCTACGCTGCATTTAGTTTT 12065
Score = 123 bits (136), Expect = 4e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || | || ||||||||||| || || ||||| ||| |||
Sbjct 12504 ATGCAAATTTTTCAAATTACGCTAACCGGAAAAACTATCACCTTGGAAGTGGAACCGTCT 12445
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| |||||||||| ||||| ||||| ||||||||||| || || || ||
Sbjct 12444 GATACTATTGAAAACGTGAAAGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 12385
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||||| |||| |||||||| || | ||||| | || || |||||||||
Sbjct 12384 CAGAGATTAATTTTCGCCGGTAAACAATTGGAAGACGGTCGTACCTTGAGCGATTATAAT 12325
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTA 156035
|| ||||| | || ||||||||||| |||
Sbjct 12324 ATCCAAAAAGAATCCACTCTTCATTTAGTTTTA 12292
Score = 113 bits (124), Expect = 7e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | ||||| | || |||||||| ||||| || ||||| |||
Sbjct 12735 AAGATGCAAATCTTCGTAAAAACTCTTACCGGAAAAACCATTACTTTGGAAGTTGAACCA 12676
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| || |||||| ||| || || |||||||||||||| || || || ||
Sbjct 12675 TCCGATACGATCGAAAACGTCAAAGCCAAGATTCAAGATAAAGAAGGAATCCCACCTGAC 12616
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| ||| | || |||| ||||||||| || | |||||| | | || || || ||
Sbjct 12615 CAGCAACGGTTAATTTTTGCCGGTAAACAATTGGAAGATGGCCGCACATTGAGCGACTAC 12556
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||||| ||||| ||||||||||||| ||
Sbjct 12555 AATATTCAAAAAGAATCGACGCTTCATTTGGT 12524
>seq52934
Length=6696
Score = 125 bits (138), Expect = 1e-23
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | ||||| | || || ||||| || || | ||||||||| |||
Sbjct 4155 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACGATCACTCTCGAAGTCGAACCTTCG 4096
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || ||| |||||| |||||||||||||| || ||||| || ||
Sbjct 4095 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATCCCTCCCGACCAG 4036
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | ||||| | ||||| ||||| | |||||| |||||| |||| ||||| |
Sbjct 4035 CAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTAGAACTCTATCCGATTACA-- 3978
Query 156003 ATATCCAAAGAGG 156015
||||||||| |||
Sbjct 3977 ATATCCAAAAAGG 3965
>seq28572
Length=14732
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | || || |||||||| ||||| |||||| | ||||| || |
Sbjct 2972 AATGCAAATCTTCGTCAAGACCTTGACTGGTAAAACGATTACACTCGAAGTTGAGCCTAG 2913
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | |||| |||||| || ||||||||||||||||| || || || || || ||
Sbjct 2912 CGACACTATTGAAAACGTCAAGGCCAAAATACAAGATAAAGAGGGAATTCCACCCGATCA 2853
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | | || | || || || || ||||||||| |||||| | || || |||||
Sbjct 2852 ACAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGAAGAACTCTCTCTGACTATAA 2793
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| |||| ||||||||||| | |||| ||||| |||
Sbjct 2792 CATCCAAAAAGAATCGACCCTTCATTTAGTCCTTCGATTGAGAGGTGGT 2744
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| || || || ||||| || || | |||||||| | |
Sbjct 2059 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAAACAATCACCCTCGAAGTCGAGCCTAGT 2000
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || || ||||| |||||||| || || || |||||||| ||
Sbjct 1999 GACACAATCGAAAATGTCAAGGCCAAAATCCAAGATAAGGAGGGAATTCCTCCAGACCAG 1940
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| ||||| || || |||||||| ||||||| | || |||||||||
Sbjct 1939 CAACGTCTCATTTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTCTCGGATTATAAT 1880
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| |||| ||||||||||| | |||| |||||||||
Sbjct 1879 ATTCAAAAAGAATCGACTCTTCATTTAGTCCTCCGATTGAGAGGCGGT 1832
Score = 96.9 bits (106), Expect = 5e-15
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | ||||| || || || ||||| || || | |||||||| |
Sbjct 3199 ATGCAGATCTTCGTAAAAACCTTAACCGGCAAAACCATCACTCTCGAAGTCGAGCCTAGC 3140
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| |||||| || ||||| || |||||||||||||| ||||| || ||
Sbjct 3139 GACACGATTGAAAACGTCAAGGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGACCAG 3080
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | |||||| |||||||| || ||||||||| ||||| | || || ||||
Sbjct 3079 CAACGTCTGATTTTCGCCGGTAAACAACTCGAAGATGGTAGAACACTTTCGGACTATA-- 3022
Query 156003 ATATCCAAAGAG 156014
| ||||||| ||
Sbjct 3021 ACATCCAAAAAG 3010
>seq7792
Length=27931
Score = 118 bits (130), Expect = 2e-21
Identities = 161/224 (72%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 18180 CTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCtttttt 18239
|||| || || ||||||||||||||||| || || || || ||||||| |||| ||||
Sbjct 19175 CTTCGTCCCTTGATATTAATTCGTTACTGAAAGTCAATCCAGGCATTAGGCCTCGCTTTT 19234
Query 18240 ttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACGCGAACG 18299
| ||||||||||| | || ||||| | |||||||| || || || ||| || ||||
Sbjct 19235 TAAGCCAAAATATTGCAGCAAAACTTCCTGAAAAGAAGATGCCTTCGACGGCAGCAAACG 19294
Query 18300 CTATTAATCTTTCAGCAAAACT-GTATTTATTGCTCAG-TATCCATTTTTGTGCCCATTC 18357
|||| | ||||| ||||| | | ||| || |||| ||||||||| ||||| ||
Sbjct 19295 CTATGATCCTTTCTCCAAAAGTAGCATT--TTTATCAGCTATCCATTTCAACGCCCAGTC 19352
Query 18358 TCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACA 18401
| ||| | ||| || || | || |||||||| ||||
Sbjct 19353 TGCTTTCTTCTTAACACAAGGCATTGTTTCAATAGCATTGAACA 19396
>seq13914
Length=11729
Score = 113 bits (124), Expect = 7e-20
Identities = 111/141 (79%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 18180 CTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCtttttt 18239
|||| ||||| ||||||||||| || || || || | || ||||||| || |||||||
Sbjct 7886 CTTCGTCTCTTGATATTAATTCATTGCTGAAAGTCAGTCCAGGCATTAGGCCCCTTTTTT 7945
Query 18240 ttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC-GCACGCGAAC 18298
| ||||||||||||| || ||||| | ||||||||| ||||| || || ||| || ||
Sbjct 7946 TAAGCCAAAATATCGCAGCAAAACTTCCAGAAAAGAAAATACCTTCGACAGCA-GCAAAA 8004
Query 18299 GCTATTAATCTTTCAGCAAAA 18319
||||| | |||||| |||||
Sbjct 8005 GCTATGATTCTTTCTCCAAAA 8025
Score = 87.8 bits (96), Expect = 3e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 18421 ATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGC 18480
|||||| || |||||||| || ||||| |||||||| ||||||| | || || |
Sbjct 8198 ATCTTTAATGTAAGTGTCAATCAACAAGCTGTACATTTCTGAATGTACATTCTCAATTGT 8257
Query 18481 TATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTC 18540
|| ||||| | ||||| |||| || || ||| ||| | || |||| | ||
Sbjct 8258 GATTTGAAATCCGTAAAAAAATCTGGCTTCAGGAATTTGTACTTCTTGGAAAAAACGCTC 8317
Query 18541 TACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAAC 18591
|| ||||| |||||||| ||||| |||| | ||||||||||| |||||
Sbjct 8318 GACTAAATTTTCATTAACGATACCATCAGAGGCAGCGAAAAATGCTAAAAC 8368
>seq14379
Length=4834
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 76494 ATAATAATGATAATATAAGCAAGAAAATAACAGGTCAATATGTATCTAAAGAAATTATTT 76553
||||||| || | |||| ||| || || ||||| |||||| | |||||| | || |
Sbjct 4291 ATAATAAATATGAAATAAACAAACAAGTATCAGGTACATATGTCTGCAAAGAACTCATCT 4350
Query 76554 TAGATATTTCATCTTGGATTTCAATTGAATTTTATATGAAATGTAACGATATAATAATTA 76613
|||| ||| ||||||||||||| |||||| ||| |||||||||| ||||| || | |
Sbjct 4351 TAGACATTGCATCTTGGATTTCTCCTGAATTCTATTTGAAATGTAATGATATTATTTTGA 4410
Query 76614 ATTATTATAAAAACGAATTTaaaaaaa 76640
| ||| | || | |||| | ||||||
Sbjct 4411 AACATTTTGAACAAGAATATCAAAAAA 4437
>seq77090
Length=20911
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/134 (76%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 155924 AGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAG 155983
|||||| ||||| || |||||| | ||||||| || |||||||| || |||||| |
Sbjct 10507 AGGCATTCCTCCTGATCAACAACGTTTGATTTTCGCTGGTAAGCAACTTGAAGATGGACG 10566
Query 155984 AACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAG 156043
|||| | || ||||| || || ||||| ||||| | |||||||||||| |||| ||
Sbjct 10567 AACTCTTTCTGATTACAACATCCAAAAAGAATCGACGTTACATTTAGTGTTACGATTGAG 10626
Query 156044 AGGCGGTG-TAAAA 156056
||| || | |||||
Sbjct 10627 AGGTGGGGCTAAAA 10640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731136596717600
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