Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 105 4e-18
seq63578 93.3 3e-14
>seq28572
Length=14732
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| || || |||||||||||||| || | | |||| || ||||| || ||||||||
Sbjct 3009 TCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAA 3068
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||| ||||||||||| | || | || || || || | |||||| |||||| |
Sbjct 3069 ATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCCTGAATTTTTGCCTTGACGTTT 3128
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || | | |||||| || | || ||||| || || || | ||| |||||
Sbjct 3129 TCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACG 3188
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 3189 AAGATCTGCAT 3199
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || ||||| | ||||| | |||| || || || ||||| ||||| |||||
Sbjct 1833 CCGCCTCTCAATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGAG 1892
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || || ||||| ||||||||||| || || |||||||||||| | ||
Sbjct 1893 AGAGTTCTGCCGTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGGA 1952
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | ||||| ||||| | | || | ||| | | ||||||
Sbjct 1953 ATTCCCTCCTTATCTTGGATTTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCGACT 2012
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| || || || || || | ||| || || || || |||||
Sbjct 2013 TCGAGGGTGATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 2059
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| || || || || || || || | || | || || ||||||||||| ||||||
Sbjct 3237 TCCTTTTGGATATTGTAATCGGAAAGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAG 3296
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||| ||||| || || | || | || ||||| || | ||||| |||||| |
Sbjct 3297 ATCAGACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTCGCCTTGACGTTT 3356
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| ||| | | || || || | ||| ||||| || || || | || |||||
Sbjct 3357 TCGATCGTATCACTCGGTTCAACTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACG 3416
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 3417 AAGATCTGCAT 3427
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| || || |||||||||||||| || | | |||| || ||||| || || || |||
Sbjct 2325 TCTTTTTGGATGTTATAGTCCGAAAGAGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAG 2384
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || |||||||| || | || | |||||||| || | ||||| ||||| |
Sbjct 2385 ATAAGACGTTGCTGATCAGGGGGAATTCCCTCCTTATCTTGAATTTTGGCCTTGACATTT 2444
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| ||| | | |||||| || | || || || || || || | |||||| ||
Sbjct 2445 TCGATCGTGTCACTAGGCTCGACCTCGAGTGTGATAGTTTTACCAGTTAAGGTCTTGACG 2504
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 2505 AAAATTTGCAT 2515
>seq63578
Length=26733
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || | || || || |||| ||||| ||| || |||||||||||||| ||
Sbjct 11592 TTCCACCACGTAATCTGAGTACCAAGTGAAGAGTGGATTCTTTCTGAATGTTATAATCAC 11651
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
|| | || |||| |||| || || ||||| ||||||| ||||||||||||| | |
Sbjct 11652 TCAGAGTACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCGTTGCTGGTCTGGTG 11711
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | || || || || | ||||| |||||| | | || | || | || |
Sbjct 11712 GTATGCCTTCTTTATCCTGAATTTTAGCTTTGACATTTTCAATGGTATCGGACGGTTCCA 11771
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | ||||||||| ||||| ||||| || || || || || |||||
Sbjct 11772 CCTCCAAGGTTATGGTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 11820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325373717338934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |