Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq28572 154 2e-32
seq63578 138 2e-27
seq52934 125 1e-23
seq77090 93.3 7e-14
seq46443 93.3 7e-14
>seq28572
Length=14732
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || || || || ||||| ||||| | || || || | || ||
Sbjct 2970 TGCAAATCTTCGTCAAGACCTTGACTGGTAAAACGATTACACTCGAAGTTGAGCCTAGCG 2911
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| |||| || || ||||||||| |||||| || ||||||||||||||||
Sbjct 2910 ACACTATTGAAAACGTCAAGGCCAAAATACAAGATAAAGAGGGAATTCCACCCGATCAAC 2851
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | ||||| || || || |||||| | || ||| ||||| | | || ||||| |
Sbjct 2850 AACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGAAGAACTCTCTCTGACTATAACA 2791
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| |||||||||||||| | |||||||| | ||||| ||||| ||||
Sbjct 2790 TCCAAAAAGAATCGACCCTTCATTTAGTCCTTCGATTGAGAGGTGGTA 2743
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| |||||||| |||||||| || | || || || | || |
Sbjct 2058 TGCAAATTTTCGTCAAAACCTTAACAGGTAAAACAATCACCCTCGAAGTCGAGCCTAGTG 1999
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| || ||||| ||| ||| || || ||||| || || || |
Sbjct 1998 ACACAATCGAAAATGTCAAGGCCAAAATCCAAGATAAGGAGGGAATTCCTCCAGACCAGC 1939
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | |||||||| || || |||||| | || || ||||| | | ||||||||||
Sbjct 1938 AACGTCTCATTTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTCTCGGATTATAATA 1879
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||||||| | |||||||| | ||||| ||||| ||||
Sbjct 1878 TTCAAAAAGAATCGACTCTTCATTTAGTCCTCCGATTGAGAGGCGGTA 1831
Score = 132 bits (146), Expect = 8e-26
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| ||||| || ||||| || ||| | || || || | || ||
Sbjct 3198 TGCAGATCTTCGTAAAAACCTTAACCGGCAAAACCATCACTCTCGAAGTCGAGCCTAGCG 3139
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| |||| || || ||||| || |||||||||||| || || || || |
Sbjct 3138 ACACGATTGAAAACGTCAAGGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGACCAGC 3079
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || ||||| || ||||||||| | || ||| |||||| | | || ||||| |
Sbjct 3078 AACGTCTGATTTTCGCCGGTAAACAACTCGAAGATGGTAGAACACTTTCGGACTATAACA 3019
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| ||| | ||||| || | || | ||||||||
Sbjct 3018 TCCAAAAAGAATCTACTTTACATTTGGTTCTCCGTCTCAGAGGAGG 2973
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || ||||| || || | || || || | || |
Sbjct 2514 TGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATCACACTCGAGGTCGAGCCTAGTG 2455
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| || ||||| ||| ||| || || ||||| || ||||| |
Sbjct 2454 ACACGATCGAAAATGTCAAGGCCAAAATTCAAGATAAGGAGGGAATTCCCCCTGATCAGC 2395
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || || ||||| ||||||||| | || ||| ||||| | | || ||||| |
Sbjct 2394 AACGTCTTATCTTTGCTGGTAAACAACTCGAAGATGGAAGAACTCTTTCGGACTATAACA 2335
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| |||||||||||||| | |||||||| | ||||| ||||| ||||
Sbjct 2334 TCCAAAAAGAATCGACATTGCATTTAGTTCTCCGATTGAGAGGTGGTA 2287
Score = 105 bits (116), Expect = 1e-17
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| ||||| || ||||| || ||| | || ||||| | | |
Sbjct 2742 TGCAGATTTTCGTCAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTAGAGCCCAGTG 2683
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| || |||||| || ||| || || ||||| || |||||||
Sbjct 2682 ACACCATCGAAAATGTCAAGGCTAAAATTCAGGATAAGGAGGGAATTCCCCCTGATCAAC 2623
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | ||||| || ||||||||| | || || |||| | | ||||| || |
Sbjct 2622 AACGTTTAATTTTCGCCGGTAAACAACTCGAAGACGGCCGAACTCTTTCCGATTACAACA 2563
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| |||||||||||||| | ||||| || | || | |||||||
Sbjct 2562 TCCAAAAAGAATCGACATTACATTTGGTTCTCCGTCTCCGAGGAGG 2517
>seq63578
Length=26733
Score = 138 bits (152), Expect = 2e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || || || |||| |||||||| || || | || || |||| |
Sbjct 12503 TGCAAATTTTTCAAATTACGCTAACCGGAAAAACTATCACCTTGGAAGTGGAACCGTCTG 12444
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| |||| || ||| ||||| ||| ||||||||||| |||||||| || |
Sbjct 12443 ATACTATTGAAAACGTGAAAGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAGC 12384
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | ||||| || ||||||||||| || || | | || || | ||||||||||
Sbjct 12383 AGAGATTAATTTTCGCCGGTAAACAATTGGAAGACGGTCGTACCTTGAGCGATTATAATA 12324
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||||||||| ||| | |||||||| |||||
Sbjct 12323 TCCAAAAAGAATCCACTCTTCATTTAGTTTTACG 12290
Score = 131 bits (144), Expect = 3e-25
Identities = 176/245 (72%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| | || |||||||| |||||| | || || |||| ||
Sbjct 12731 TGCAAATCTTCGTAAAAACTCTTACCGGAAAAACCATTACTTTGGAAGTTGAACCATCCG 12672
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || |||| || ||| || || ||| ||||||||| || ||||| || || |
Sbjct 12671 ATACGATCGAAAACGTCAAAGCCAAGATTCAAGATAAAGAAGGAATCCCACCTGACCAGC 12612
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | |||||||| ||||||||||| || ||| | || || | || || ||||
Sbjct 12611 AACGGTTAATTTTTGCCGGTAAACAATTGGAAGATGGCCGCACATTGAGCGACTACAATA 12552
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATTGA 146271
| |||||||||||||| | ||||| || |||| | | || |||| |||| ||
Sbjct 12551 TTCAAAAAGAATCGACGCTTCATTTGGTCCTACGTCTTCGCGGCGGTATGCAAATTTTTC 12492
Query 146272 AAATT 146276
|||||
Sbjct 12491 AAATT 12487
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || |||||||| || || | || || |||| |
Sbjct 12275 TGCAAATTTTCGTTAAAACGCTCACTGGAAAAACTATCACGTTAGAAGTCGAACCATCTG 12216
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||||||| ||||| ||| ||||||||| || |||||||| || |
Sbjct 12215 ACACAATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCCGACCAGC 12156
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || |||||||||||||| ||| | | || || | || || || |
Sbjct 12155 AAAGATTAATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTTTGAGCGACTACAACA 12096
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || ||||| || || | |||||||| || || || | || ||||
Sbjct 12095 TTCAGAAAGAGTCTACGCTGCATTTAGTTTTGCGTCTACGTGGTGGTA 12048
Score = 123 bits (136), Expect = 4e-23
Identities = 163/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || |||||||| || || | || || |||| ||
Sbjct 11819 TGCAAATTTTCGTTAAAACGCTCACTGGAAAAACCATAACCTTGGAGGTGGAACCGTCCG 11760
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||| ||| |||||| || |||||||||||| ||||| || || |
Sbjct 11759 ATACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGCATACCACCAGACCAGC 11700
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| || | || ||||| |||||||| || || ||| | || | | |||||||| |
Sbjct 11699 AACGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGTACTCTGAGTGATTATAACA 11640
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| ||| | || || ||| | ||||| | || ||
Sbjct 11639 TTCAGAAAGAATCCACTCTTCACTTGGTACTCAGATTACGTGGTGG 11594
Score = 120 bits (132), Expect = 5e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| | || || ||||| || || | || ||||| | ||
Sbjct 12047 TGCAAATTTTCGTAAAAACGCTCACCGGTAAAACTATCACGTTGGAAGTAGAGCCATCCG 11988
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | ||||| ||| || || ||| |||||||| ||||||||||| || |
Sbjct 11987 ATACAATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATTCCACCCGACCAGC 11928
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || | ||||| || ||||||||||| || || | ||||||| ||||| ||||
Sbjct 11927 AGCGATTAATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACGTTAAGCGATTACAATA 11868
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||| ||||| || | ||||| || |||||
Sbjct 11867 TCCAAAAGGAATCCACCCTACATTTGGTCTTACG 11834
Score = 111 bits (122), Expect = 2e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| ||||| || || || ||||| | || || |||| ||
Sbjct 11591 TGCAAATTTTCGTGAAAACTTTAACCGGCAAGACTATTACCTTGGAAGTCGAACCGTCCG 11532
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | || || ||| |||||| ||| ||||||||| || || || || || |
Sbjct 11531 ATACCATCGAGAACGTGAAAGCTAAAATTCAAGATAAAGAAGGTATCCCGCCTGACCAGC 11472
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | ||||| || || || ||||| || ||| | ||||||| ||||||||||
Sbjct 11471 AGAGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACGTTAAGCGATTATAATA 11412
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| || || || || || | ||||| || || ||
Sbjct 11411 TTCAGAAGGAGTCCACCCTTCATTTGGTTTTGCG 11378
>seq52934
Length=6696
Score = 125 bits (138), Expect = 1e-23
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| |||| || ||||| || ||| | || || |||| | |
Sbjct 4154 TGCAGATCTTCGTGAAAACCCTAACGGGTAAAACGATCACTCTCGAAGTCGAACCTTCGG 4095
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||||||| |||||| ||| ||||||||| || || ||||| || |
Sbjct 4094 ATACTATTGAAAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATCCCTCCCGACCAGC 4035
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || || || ||||| || ||| |||||| || | ||||| ||||
Sbjct 4034 AACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGTAGAACTCTATCCGATTACAATA 3975
Query 146212 TACAAAAAG 146220
| |||||||
Sbjct 3974 TCCAAAAAG 3966
>seq77090
Length=20911
Score = 93.3 bits (102), Expect = 7e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191
||||||||| || ||||||||| | | ||||| || ||||| ||| | || ||| |
Sbjct 10507 AGGCATTCCTCCTGATCAACAACGTTTGATTTTCGCTGGTAAGCAACTTGAAGATGGACG 10566
Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251
||| | | ||||| || || |||||||||||||| | |||||||| |||||||| ||
Sbjct 10567 AACTCTTTCTGATTACAACATCCAAAAAGAATCGACGTTACATTTAGTGTTACGATTGAG 10626
Query 146252 AGGAGG 146257
||| ||
Sbjct 10627 AGGTGG 10632
>seq46443
Length=17015
Score = 93.3 bits (102), Expect = 7e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191
||||||||| || || |||||| | | |||||||| ||||||||| | || ||| |
Sbjct 12820 AGGCATTCCTCCTGACCAACAACGTTTGATTTTTGCTGGTAAACAACTCGAAGATGGACG 12761
Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251
|| | | |||||||| || ||||||||||| ||| | ||||||||||| |||| ||
Sbjct 12760 TACCCTTTCCGATTATAACATCCAAAAAGAATCTACTCTGCATTTAGTATTGAGATTGAG 12701
Query 146252 AGGAGG 146257
||| ||
Sbjct 12700 AGGTGG 12695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785376440347120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |