Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27] 80,386 sequences; 237,582,517 total letters Query= NC_023743.1 Length=47180 Score E Sequences producing significant alignments: (Bits) Value seq69273 91.5 4e-14 >seq69273 Length=3889 Score = 91.5 bits (100), Expect = 4e-14 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 28223 ACCGCCGTTTGCGTATCCGCGCATCAACTTGTACAGGTTGTCTACGCCAATCCTTGAAGT 28282 ||||||| | || || |||||||||| | ||| || || | |||||||||| || Sbjct 3666 ACCGCCGGTGGCATAGCCGCGCATCAGCCGGTAAAGATTCCCCACGCCAATCCGGCTGGT 3725 Query 28283 TGCCTCCTTCGTAAACACGAATTCACCACGATGCACCGTACCAGCTGGTTCATACTTACC 28342 |||||||||||| || || || |||||||| || || | || ||||| ||||| || || Sbjct 3726 TGCCTCCTTCGTGAAGACAAACTCACCACGGTGAACAATCCCCGCTGGCTCATATTTGCC 3785 Query 28343 TCCGTTACCAGTGTAGCCACCAGATGCAAA 28372 ||| | || || | || || | |||||| Sbjct 3786 GCCGGTTCCCGTAAATCCTCCGGTTGCAAA 3815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150710396841144