Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq47085 96.9 5e-15
>seq47085
Length=15572
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1240 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1181
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 1180 TCCCCGCCGGGGAGG 1166
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 1241 TAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1182
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 1181 TTCCCCGCCGGGGAG 1167
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1167 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1226
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 1227 TACTACCGAGGA 1238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652188805223840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |