Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq19381 96.9 8e-15
seq13914 86.0 1e-11
seq59517 84.2 5e-11
>seq19381
Length=19756
Score = 96.9 bits (106), Expect = 8e-15
Identities = 188/277 (68%), Gaps = 3/277 (1%)
Strand=Plus/Plus
Query 110653 ATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACG 110712
||||||| | | || || | |||| ||| || |||| ||| | | || | |||
Sbjct 8916 ATATCGCTGGAACAAACGGCGTATCAAATGGTCTAATTCCGATGCTTCGCGTATACAATA 8975
Query 110713 ACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATC 110769
|||| || | ||| ||| | ||||| || || | || || | |||||||| ||
Sbjct 8976 ACACAGCCAGATACGTGGACCAAGGAGGCAACAAAAGACCGGGTGCTTTTGCTATTTACT 9035
Query 110770 TCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTG 110829
| |||||||||||| | ||||| |||||||| ||||| || || |||||| || |
Sbjct 9036 TGGAACCTTGGCATGCGGATATTTTTGAATTTTTAGAGCTGCGAAAAAATTCTGGTAAAG 9095
Query 110830 AAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAAC 110889
|||| | || | ||||||||||| ||||||||||| | || |||||||| |
Sbjct 9096 AAGAGTCTCGCGCTAGGGATTTATTTTACGCAATGTGGATCCCCGACGAATTCATGAGAA 9155
Query 110890 GTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCC 110926
| || || || ||| | ||| | | ||||||||
Sbjct 9156 GGGTCGAAAAAGATGAAAAATGGAGTTTGATGTGTCC 9192
>seq13914
Length=11729
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 131796 TTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTA 131855
|||| | ||||| || ||||| | || ||||| | || | ||| | ||||
Sbjct 8077 TTAAGAGAAAAGCTGACTGGGCGTTGAAGTGGATAAATGACAAAAACGCGACTTTTGGAG 8018
Query 131856 CAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTA 131915
|||| | ||||||||||| ||| |||||||| |||||||| || ||| ||| |
Sbjct 8017 AAAGAATCATAGCTTTTGCTGCTGTCGAAGGTATTTTCTTTTCTGGAAGTTTTGCTGCGA 7958
Query 131916 TCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCT 131975
| ||||||||||| || | || | ||||||||||| | || |||| |||| || |
Sbjct 7957 TATTTTGGCTTAAAAAAAGGGGCCTAATGCCTGGACTGACTTTCAGCAATGAATTAATAT 7898
Query 131976 CGAGAGATGAAG 131987
| ||||| ||||
Sbjct 7897 CAAGAGACGAAG 7886
>seq59517
Length=19559
Score = 84.2 bits (92), Expect = 5e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 111036 TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095
|||||| ||| | || || ||| ||||||| ||||| ||||| || ||||| ||||||
Sbjct 13767 TGGTTCGCAATTTTAGACTCTCAAATTGAAACAGGAACACCTTACATGTTGTACAAAGAT 13826
Query 111096 CATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154
|||| | ||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct 13827 GCCTGTAATAGAAAATCCAATCATCAAAATTTAGGAACTATTAAAAGTAGTAATTTGTG 13885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1185590447348946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |