Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 141 6e-29
seq28572 131 1e-25
seq52934 113 3e-20
seq77090 96.9 2e-15
seq46443 91.5 1e-13
>seq63578
Length=26733
Score = 141 bits (156), Expect = 6e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | |||||| ||||||||||| ||| || ||||| || |||||||||
Sbjct 11821 ACCACCGCGAAGACGTAAGACCAAATGTAGGGTGGATTCCTTTTGGATATTGTAATCGCT 11880
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| |||| ||||||||||| ||||| ||||| || |||||||| || | ||
Sbjct 11881 TAACGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATTAATCGCTGCTGGTCGGGTGG 11940
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| ||| || | || ||||| || | || ||| || || |
Sbjct 11941 AATACCTTCTTTGTCTTGAATCTT-GGCTTTAACATTCTCGATTGTATCGGATGGCTCTA 11999
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||| |||||||| || | ||||||||| || || ||||||
Sbjct 12000 CTTCCAACGTGATAGTTTTACCGGTGAGCGTTTTTACGAAAATTTGCATA 12049
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||| | |||||| || ||||| |||||| |||||||| || || ||||||
Sbjct 12278 CCACCTCGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTC 12337
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || || |||| ||||||||||| ||||| ||||| || | |||||| || | ||
Sbjct 12338 AAGGTACGACCGTCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGG 12397
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| |||||| |||| || | || | || || | ||||||
Sbjct 12398 ATGCCTTCTTTGTCTTGAATTTTGGCTTTC-ACGTTTTCAATAGTATCAGACGGTTCCAC 12456
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| ||||| || |||| ||| || ||| || ||||||
Sbjct 12457 TTCCAAGGTGATAGTTTTTCCGGTTAGCGTAATTTGAAAAATTTGCATA 12505
Score = 96.9 bits (106), Expect = 2e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||||| |||||||| || || |||||||| || ||||| ||| | |||||| |
Sbjct 12517 ACGTAGGACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTGCGGCC 12576
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| ||||||||||| ||||||||||| || || ||||| || | || | ||||||||
Sbjct 12577 ATCTTCCAATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCTTCTTT 12636
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
|| ||| || | || || | || | || ||| || ||| || || | || |
Sbjct 12637 ATCTTGAATCTT-GGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAAGTAA 12695
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| ||||| || || | |||||||| ||||| |||||
Sbjct 12696 TGGTTTTTCCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
>seq28572
Length=14732
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| || | |||||||||| ||| || ||||| || |||||||||||
Sbjct 3200 ACCACCTCTCAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGA 3259
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || |||| || | ||| ||||| || || |||| ||| || ||||| | ||
Sbjct 3260 AAGCGTTCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGG 3319
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| || || ||||||| | | || | || | || || || | ||| |
Sbjct 3320 AATACCTTCCTTATCTTGAATTTTC-GCCTTGACGTTTTCGATCGTATCACTCGGTTCAA 3378
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| |||||||| || ||||||||||| |||||||||||
Sbjct 3379 CTTCGAGGGTGATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCAT 3427
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | ||| | |||||||||| ||| |||||||| ||||| || || ||
Sbjct 2973 CCTCCTCTGAGACGGAGAACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAA 3032
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| | | || || | |||||| ||||| ||||||| ||| ||||| || | ||
Sbjct 3033 AGTGTTCTACCATCTTCGAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGG 3092
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701
| |||||||| || |||||| || | || | ||| |||||||| | || ||
Sbjct 3093 ATGCCTTCTTTATCCTGAATTTT-TGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGAC 3151
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| ||||| || ||||| |||||||| ||||||||||||
Sbjct 3152 TTCGAGAGTGATGGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATA 3200
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||||||| || | ||| | ||||| ||| || ||||| || |||||||||||
Sbjct 2060 ACCTCCTCTCAATCGAAGCACGAGATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGA 2119
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || | || || | |||||| ||||||||||| ||||| || |||||| | ||
Sbjct 2120 GAGGGTTCGGCCATCTTCGAGTTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGG 2179
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| || || ||||| | | || | || | |||||| || | || |
Sbjct 2180 AATTCCTTCCTTATCTTGGATTTT-AGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTA 2238
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||| |||| ||||| || ||||| ||||||
Sbjct 2239 CTTCGAGAGTGATGGTTTTACCCGTTAGGGTTTTAACGAAGATTTGCATA 2288
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||| | ||| | |||||||||| || |||||||| ||||||||||||||
Sbjct 2517 CCTCCTCGGAGACGGAGAACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAA 2576
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || |||| || | |||||| ||||| ||||| ||||| || ||||| | ||
Sbjct 2577 AGAGTTCGGCCGTCTTCGAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGA 2636
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || |||||| | | |||| || | |||||| || | || ||
Sbjct 2637 ATTCCCTCCTTATCCTGAATTTT-AGCCTTGACATTTTCGATGGTGTCACTGGGCTCTAC 2695
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| |||||||| ||||| ||||| || || |||||||||
Sbjct 2696 TTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTGACGAAAATCTGCATA 2744
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||||||| || | || ||||| ||||| |||||||| || || ||||| ||
Sbjct 1832 ACCGCCTCTCAATCGGAGGACTAAATGAAGAGTCGATTCTTTTTGAATATTATAATCCGA 1891
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || | |||| || | |||||||||||| ||||| | ||| ||||| ||| | ||
Sbjct 1892 GAGAGTTCTGCCGTCTTCGAGTTGTTTTCCGGCGAAAATGAGACGTTGCTGGTCTGGAGG 1951
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || ||||| | | |||| || | ||||| || | || |
Sbjct 1952 AATTCCCTCCTTATCTTGGATTTT-GGCCTTGACATTTTCGATTGTGTCACTAGGCTCGA 2010
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| |||||||||||||| ||||| || || || ||||||
Sbjct 2011 CTTCGAGGGTGATTGTTTTACCTGTTAAGGTTTTGACGAAAATTTGCATA 2060
Score = 105 bits (116), Expect = 4e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
|| ||||||||||| || || |||||| || || |||||||| || || || | |
Sbjct 1617 CGCAACACCAAATGCAGCGTCGACTCTTTCTGGATATTGTAATCCGAAAGAGTTCTACCA 1676
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| || | || |||||||| ||||| ||||| |||||||| | || | |||||||||
Sbjct 1677 TCTTCAAGCTGCTTTCCGGCGAAAATTAAACGTTGCTGATCGGGAGGGATTCCTTCTTTG 1736
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| || || | | || | || | ||||||||| | ||| || || | || ||
Sbjct 1737 TCTTGGATCTT-AGCCTTGACGTTTTCGATGGTGTCGCTAGGTTCGACTTCGAGAGTAAT 1795
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
||||||||| || || || || || ||||| ||||||
Sbjct 1796 CGTTTTACCGGTCAAGGTCTTAACGAAGATTTGCATA 1832
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| || | || ||||| | || |||||||| ||||| || || ||
Sbjct 2288 ACCACCTCTCAATCGGAGAACTAAATGCAATGTCGATTCTTTTTGGATGTTATAGTCCGA 2347
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | | || || | |||||| || ||||| || | ||| |||||||| | ||
Sbjct 2348 AAGAGTTCTTCCATCTTCGAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCAGGGGG 2407
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || |||||| | | |||| || | ||||| || | || |
Sbjct 2408 AATTCCCTCCTTATCTTGAATTTT-GGCCTTGACATTTTCGATCGTGTCACTAGGCTCGA 2466
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| |||||||| ||||| || || || || || |||||
Sbjct 2467 CCTCGAGTGTGATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2515
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| || | || ||||| || || |||||||| ||||| || || ||
Sbjct 2744 ACCACCTCTCAATCGAAGGACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGA 2803
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || | | | || || | |||||| || || || || | ||| || ||||| | ||
Sbjct 2804 GAGAGTTCTTCCATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGG 2863
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || ||||| || ||||| | | || | || | |||||||| | || |
Sbjct 2864 AATTCCCTCTTTATCTTGTATTTT-GGCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAA 2922
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || ||||||||||| || || || || || ||||| |||||
Sbjct 2923 CTTCGAGTGTAATCGTTTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 2971
>seq52934
Length=6696
Score = 113 bits (124), Expect = 3e-20
Identities = 141/191 (74%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619
||||||| || ||||||||||| || || | | || |||||||| |||||||| || |
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679
||||||| ||||| || | || | ||||||||| || |||||| | || ||||
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTT-AGCTTTTACATTT 4084
Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738
|| | || || | ||| || || | |||||||||||||| |||| ||||| ||
Sbjct 4085 TCAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACG 4144
Query 33739 AAGATCTGCAT 33749
|||||||||||
Sbjct 4145 AAGATCTGCAT 4155
>seq77090
Length=20911
Score = 96.9 bits (106), Expect = 2e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||||||| |||||||| ||||||| || |||||||| ||||||||||| ||
Sbjct 10632 CCACCTCTCAATCGTAACACTAAATGTAACGTCGATTCTTTTTGGATGTTGTAATCAGAA 10573
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635
|| || ||| | || || | ||| || || || ||||||||||| || |||||
Sbjct 10572 AGAGTTCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGTTGTTGATC 10520
>seq46443
Length=17015
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||||||| | || || ||||| ||||| |||||||| ||||| ||||||||
Sbjct 12695 CCACCTCTCAATCTCAATACTAAATGCAGAGTAGATTCTTTTTGGATGTTATAATCGGAA 12754
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635
|| || ||| | || || | |||||| || |||||||||||||| || || ||
Sbjct 12755 AGGGTACGTCCATCTTCGAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTC 12807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328381967253120
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