Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 129 6e-25
seq28572 118 1e-21
seq52934 91.5 1e-13
>seq63578
Length=26733
Score = 129 bits (142), Expect = 6e-25
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| |||||||| || || |||| ||||| |||||| | ||||||||||| |
Sbjct 11627 GATTCTTTCTGAATGTTATAATCACTCAGAGTACGGCCATCTTCCAACTGTTTACCGGCA 11686
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | || || || ||||| ||||||||||||||||| |||||| ||| |
Sbjct 11687 AAGATCAATCGTTGCTGGTCTGGTGGTATGCCTTCTTTATCCTGAATTTTAGCTTTGACA 11746
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||||| ||| ||||| || | || | ||||| ||||| || |||||
Sbjct 11747 TTTTCAATGGTATCGGACGGTTCCACCTCCAAGGTTATGGTTTTTCCAGTGAGCGTTTTA 11806
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 11807 ACGAAAATTTGCAT 11820
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||| ||||| | | |||||||| ||||||||||||||||||| ||||| |
Sbjct 12062 CGCAAAACTAAATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCGCTCAAAGTACGACCA 12121
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | |||||||||| | |||| | || || || || || || |||||||||
Sbjct 12122 TCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGCTGGTCGGGTGGGATACCTTCTTTA 12181
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| ||| | | ||| | || || | || || ||||| | ||| |
Sbjct 12182 TCTTGGATTTTTGCTTTTACATTTTCGATTGTGTCAGATGGTTCGACTTCTAACGTGATA 12241
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| ||||| || ||||| | |||||| |||||
Sbjct 12242 GTTTTTCCAGTGAGCGTTTTAACGAAAATTTGCAT 12276
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||||||| | | || ||||||||||| ||||||||||||| || || ||||||
Sbjct 12524 ACCAAATGAAGCGTCGATTCTTTTTGAATATTGTAGTCGCTCAATGTGCGGCCATCTTCC 12583
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| |||||||||| | | |||| || || || || || || || ||||||||||| |
Sbjct 12584 AATTGTTTACCGGCAAAAATTAACCGTTGCTGGTCAGGTGGGATTCCTTCTTTATCTTGA 12643
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || ||| | | ||| | ||||||| || || ||||| | || | |||||
Sbjct 12644 ATCTTGGCTTTGACGTTTTCGATCGTATCGGATGGTTCAACTTCCAAAGTAATGGTTTTT 12703
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || |||||||||| ||| || |||||
Sbjct 12704 CCGGTAAGAGTTTTTACGAAGATTTGCAT 12732
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|| ||||| ||||| | | || |||||||| || || || ||||||| ||||||
Sbjct 12290 CGTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTATAATCGCTCAAGGTACGACCG 12349
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | |||||||||| | |||| | ||| || || || || |||||||||||
Sbjct 12350 TCTTCCAATTGTTTACCGGCGAAAATTAATCTCTGCTGGTCGGGTGGGATGCCTTCTTTG 12409
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| ||||| | ||| | |||||| | ||| |||||||| | || |
Sbjct 12410 TCTTGAATTTTGGCTTTCACGTTTTCAATAGTATCAGACGGTTCCACTTCCAAGGTGATA 12469
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || || || || ||||| |||||
Sbjct 12470 GTTTTTCCGGTTAGCGTAATTTGAAAAATTTGCAT 12504
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||||||||| | | | ||||| || ||||| || || ||||| | || || |
Sbjct 11378 CGCAAAACCAAATGAAGGGTGGACTCCTTCTGAATATTATAATCGCTTAACGTGCGGCCA 11437
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | || || || | | || | | ||| || || || || || |||||||||
Sbjct 11438 TCTTCCAATTGCTTTCCAGCGAAAATCAATCTCTGCTGGTCAGGCGGGATACCTTCTTTA 11497
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| ||||| | || | ||||||| ||| || ||||| | || |
Sbjct 11498 TCTTGAATTTTAGCTTTCACGTTCTCGATGGTATCGGACGGTTCGACTTCCAAGGTAATA 11557
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || || | |||||| | |||||| |||||
Sbjct 11558 GTCTTGCCGGTTAAAGTTTTCACGAAAATTTGCAT 11592
>seq28572
Length=14732
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||||||||||| | || |||||||| ||||| ||||| | || | ||||||
Sbjct 2990 AACCAAATGTAAAGTAGATTCTTTTTGGATGTTATAGTCCGAAAGTGTTCTACCATCTTC 3049
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
||| |||||||||| | || ||||| || || || ||||| ||||||||||||||
Sbjct 3050 GAGTTGTTTACCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCTTCTTTATCCTG 3109
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||||||| || | | ||| | || ||| | ||||| ||||||| || | |||||
Sbjct 3110 AATTTTTGCCTTGACGTTTTCAATCGTGTCGCTAGGCTCGACTTCGAGAGTGATGGTTTT 3169
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || | ||||||| ||| ||||||||
Sbjct 3170 GCCGGTTAAGGTTTTTACGAAGATCTGCAT 3199
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| || | ||||||||||| | || || ||||| || ||||| ||| | || ||
Sbjct 3209 CAATCGAAGAACCAAATGTAAAGTCGATTCCTTTTGGATATTGTAATCGGAAAGCGTTCG 3268
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||||| || || || | |||| ||||| |||||||| ||||| || |||||
Sbjct 3269 GCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGTTGATCAGGAGGAATACCTTC 3328
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| |||||| || | | ||| | ||||| |||| || ||||||| ||
Sbjct 3329 CTTATCTTGAATTTTCGCCTTGACGTTTTCGATCGTATCACTCGGTTCAACTTCGAGGGT 3388
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||||||||||| ||||||| ||| ||||||||
Sbjct 3389 GATGGTTTTACCAGTCAACGTTTTTACGAAGATCTGCAT 3427
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||||||||||| | || |||||||| |||||||| ||| | || || |||||
Sbjct 2534 AACCAAATGTAATGTCGATTCTTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCTTC 2593
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
||| |||||||||| | |||| ||| |||||||| || || || || || |||||
Sbjct 2594 GAGTTGTTTACCGGCGAAAATTAAACGTTGTTGATCAGGGGGAATTCCCTCCTTATCCTG 2653
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
|||||| || | | ||| | || || | ||||| ||||||| || | |||||
Sbjct 2654 AATTTTAGCCTTGACATTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTT 2713
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||| | ||||| | ||||||||||||
Sbjct 2714 ACCAGTTAAGGTTTTGACGAAAATCTGCAT 2743
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| |||| || |||||||| ||||| ||| | ||| || ||||||||| ||
Sbjct 2084 ATGTAAAGTTGATTCCTTTTGAATATTGTAATCGGAGAGGGTTCGGCCATCTTCGAGTTG 2143
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||| |||| | | |||| ||| ||||||||||| || || ||||| ||||| |||||
Sbjct 2144 TTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGAATTCCTTCCTTATCTTGGATTTT 2203
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
|| | | ||| | || || | ||||| ||||||| || | |||||||| ||
Sbjct 2204 AGCCTTGACGTTTTCGATGGTGTCACTGGGCTCTACTTCGAGAGTGATGGTTTTACCCGT 2263
Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123
|| ||||| | ||| || |||||
Sbjct 2264 TAGGGTTTTAACGAAGATTTGCAT 2287
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|| ||||| | | | || |||||||| ||||| ||||| | || | |||||||
Sbjct 2763 ACTAAATGAAGGGTCGATTCTTTTTGGATGTTATAGTCAGAGAGAGTTCTTCCATCTTCG 2822
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| ||||| || | |||| ||||| |||||||| || || || || ||||||||
Sbjct 2823 AGTTGTTTGCCAGCGAAGATGAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCTTGT 2882
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
||||| || | | ||| | ||| ||| | ||||| ||||||| || | |||||||
Sbjct 2883 ATTTTGGCCTTGACGTTTTCAATAGTGTCGCTAGGCTCAACTTCGAGTGTAATCGTTTTA 2942
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | ||| || |||||
Sbjct 2943 CCAGTCAAGGTCTTGACGAAGATTTGCAT 2971
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| || | ||| ||||| | | || |||||||| ||||| ||||| | || |
Sbjct 2297 CAATCGGAGAACTAAATGCAATGTCGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCT 2356
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||||||||| |||||||| | | |||| ||||| || ||||| || || || || ||
Sbjct 2357 TCCATCTTCGAGTTGTTTACCAGCAAAGATAAGACGTTGCTGATCAGGGGGAATTCCCTC 2416
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| |||||| || | | ||| | || || | ||||| || |||| ||
Sbjct 2417 CTTATCTTGAATTTTGGCCTTGACATTTTCGATCGTGTCACTAGGCTCGACCTCGAGTGT 2476
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||||||||| | || || | |||||| |||||
Sbjct 2477 GATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2515
>seq52934
Length=6696
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993
||||||| || ||||| ||| | || | |||||| | || || |||| |||
Sbjct 3966 CTTTTTGGATATTGTAATCGGATAGAGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGA 4025
Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053
| | ||| || || || ||||| || ||||||||||| |||||| ||| | | ||
Sbjct 4026 TCAAACGTTGCTGGTCGGGAGGGATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 4085
Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113
| | |||||| | || || ||||||| || | ||||||||| || || ||||| | ||
Sbjct 4086 CAATAGTATCCGAAGGTTCGACTTCGAGAGTGATCGTTTTACCCGTTAGGGTTTTCACGA 4145
Query 132114 AAATCTGCAT 132123
| ||||||||
Sbjct 4146 AGATCTGCAT 4155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476132289150960
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