Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trionymus_20perrisii_20[genbank_20GCA_5F900050545.1_202016-03-27]
80,386 sequences; 237,582,517 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq63578 96.9 3e-15
seq28572 87.8 1e-12
>seq63578
Length=26733
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||| |||||||| | ||||| || ||||| ||| |||| ||||| |
Sbjct 11820 ATGCAAATTTTCGTTAAAACGCTCACTGGAAAAACCATAACCTTGGAGGTGGAACCGTCC 11761
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | ||| | || ||| |||||| || ||||||||| | || || ||
Sbjct 11760 GATACCATTGAAAATGTCAAAGCTAAAATTCAGGATAAAGAAGGCATACCACCAGACCAG 11701
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | ||| || ||||| || |||||| ||| || | ||||| |||
Sbjct 11700 CAACGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGTACTCTGAGTGATTATAAC 11641
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|| || |||||||| || || || || ||| | || ||||| || |||
Sbjct 11640 ATTCAGAAAGAATCCACTCTTCACTTGGTACTCAGATTACGTGGTGGA 11593
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||||||||| |||||||| | ||||| || || || || | ||| |||||
Sbjct 12277 AATGCAAATTTTCGTTAAAACGCTCACTGGAAAAACTATCACGTTAGAAGTCGAACCATC 12218
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
|| | | | | || ||| |||||| || |||||||| | || || ||
Sbjct 12217 TGACACAATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCCGACCA 12158
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
||||| | |||| || || ||||||||||||||| | ||| || |||| |||||
Sbjct 12157 GCAAAGATTAATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTTTGAGCGACTACAA 12098
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||| || ||||| ||||| || |||||||| ||| | |||| || ||
Sbjct 12097 CATTCAGAAAGAGTCTACGCTGCATTTAGTTTTGCGTCTACGTGGTGG 12050
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||||||||| || ||||| || || |||||||| |||||| ||||| |||||
Sbjct 11593 AATGCAAATTTTCGTGAAAACTTTAACCGGCAAGACTATTACCTTGGAAGTCGAACCGTC 11534
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
|||| | | | | |||||| |||||| || |||||||| | || ||| ||
Sbjct 11533 CGATACCATCGAGAACGTGAAAGCTAAAATTCAAGATAAAGAAGGTATCCCGCCTGACCA 11474
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|| || | |||| || || || ||||| |||||| || | ||||||| ||
Sbjct 11473 GCAGAGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACGTTAAGCGATTATAA 11414
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAATGAT 106494
|| || || || || || || ||||| || ||| | | || || ||| | ||||
Sbjct 11413 TATTCAGAAGGAGTCCACCCTTCATTTGGTTTTGCGTCTTCGTGGCGGACATTGAT 11358
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||||||| | || | || || || || || ||| ||||| |||||
Sbjct 12504 ATGCAAATTTTTCAAATTACGCTAACCGGAAAAACTATCACCTTGGAAGTGGAACCGTCT 12445
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || ||| | |||||| |||||| |||||||||||| | || || ||
Sbjct 12444 GATACTATTGAAAACGTGAAAGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 12385
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| || | |||| || || |||||||| ||||| | || || ||||||| ||
Sbjct 12384 CAGAGATTAATTTTCGCCGGTAAACAATTGGAAGACGGTCGTACCTTGAGCGATTATAAT 12325
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|| ||||||||||| || || |||||||| || | | ||||| |||
Sbjct 12324 ATCCAAAAAGAATCCACTCTTCATTTAGTTTTACGTCTTCGAGGTGGA 12277
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 106253 TTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGA 106312
||| || |||||||| || || ||||| | || || || |||||||| ||||| ||
Sbjct 12739 TTTCAAGATGCAAATCTTCGTAAAAACTCTTACCGGAAAAACCATTACTTTGGAAGTTGA 12680
Query 106313 ACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGT 106372
||| |||| | | | | || ||| || ||| || |||||||| | ||
Sbjct 12679 ACCATCCGATACGATCGAAAACGTCAAAGCCAAGATTCAAGATAAAGAAGGAATCCCACC 12620
Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432
||| || ||| || | |||| ||| || |||||||| |||||| || || ||||
Sbjct 12619 TGACCAGCAACGGTTAATTTTTGCCGGTAAACAATTGGAAGATGGCCGCACATTGAGCGA 12560
Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGT 106468
||||| || ||||||||||| || || ||||| ||
Sbjct 12559 CTACAATATTCAAAAAGAATCGACGCTTCATTTGGT 12524
>seq28572
Length=14732
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| ||||| || ||||| || ||||| || ||||| || | ||| ||| ||| |
Sbjct 2743 ATGCAGATTTTCGTCAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTAGAGCCCAGT 2684
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | | | | || || |||||| || || || || | ||| |||||||
Sbjct 2683 GACACCATCGAAAATGTCAAGGCTAAAATTCAGGATAAGGAGGGAATTCCCCCTGATCAA 2624
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | |||| || || |||||| | ||||| |||| | ||||||||||
Sbjct 2623 CAACGTTTAATTTTCGCCGGTAAACAACTCGAAGACGGCCGAACTCTTTCCGATTACAAC 2564
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|| ||||||||||| ||| ||||||| || | | | |||||||||
Sbjct 2563 ATCCAAAAAGAATCGACATTACATTTGGTTCTCCGTCTCCGAGGAGGA 2516
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||| || || || || |||||||| || || ||||| | ||| || || |
Sbjct 2972 AATGCAAATCTTCGTCAAGACCTTGACTGGTAAAACGATTACACTCGAAGTTGAGCCTAG 2913
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| || ||| | || || ||||| || ||||| || | || |||||
Sbjct 2912 CGACACTATTGAAAACGTCAAGGCCAAAATACAAGATAAAGAGGGAATTCCACCCGATCA 2853
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||| | || || | || ||||||||| | |||||| | |||| | || || ||
Sbjct 2852 ACAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGAAGAACTCTCTCTGACTATAA 2793
Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468
||| ||||||||||| || || ||||||||
Sbjct 2792 CATCCAAAAAGAATCGACCCTTCATTTAGT 2763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 401935435930688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |